Richelia sinica: B6N60_01486
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Entry
B6N60_01486 CDS
T07308
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsin
Richelia sinica
Pathway
rsin03410
Base excision repair
rsin03430
Mismatch repair
rsin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B6N60_01486
03430 Mismatch repair
B6N60_01486
03440 Homologous recombination
B6N60_01486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsin03400
]
B6N60_01486
DNA repair and recombination proteins [BR:
rsin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B6N60_01486
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B6N60_01486
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B6N60_01486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXE22800
UniProt:
A0A975Y444
LinkDB
All DBs
Position
complement(1619370..1621436)
Genome browser
AA seq
688 aa
AA seq
DB search
MVDQPATELPRTARRLPNQRWQIAPAKPELAQKLASSLDLSPIISQLLINRGMESPETAQ
LFLDPESLVLPSPLEEFPDLAVSVELLEEAITNQSKIAICGDYDADGMTSTALLLRSLRA
LGAKVDYAIPSRMHDGYGINKRIVEEFHSEGVRLILTVDNGISAFEPIARARELGLQVIV
TDHHDIPPQLPPANAILNPKLIAESSPYRGIAGVGVAYILAVSLAQQMGETKGLISPMLA
LFTLGTIADLAPLTGVNRRWVKRGLKLLPQSKLPGIQALIQIGGVQPGEGGEKVQNSKTL
KPEDIGFRLGPRINAIGRIGDPQIIIDLLTTDDYGIALTKAMQCEQTNSQRQQMCEQIEQ
EAIAIVENLYVQSLQRDRVLVVVQDYWHHGVIGIVASRLVERYGVPVFIGTYEHETVIRG
SARGIPEFHVFEALQACHDLLGKFGGHKAAGGFSLPATNLEAFRSRLCEFAQCLQPQHLK
PLLKIDAQANLNHINQHLYQQLNILHPCGIDNPDPIFWTPNVQVIEQQIVGKGHIKMTLG
QTIEHHRYEIKAIAWRWRDYFPLPPRVDIAYKLRENHFNGNTTIEMELLGVRLPQQSSQF
FSPTSHKSRATFEYNQRQYTCGIYDNEGNTELRVKNSEGKVLVMQSGNLVGLLGINRHEA
KHVDLSQPPYDGIIQAAFQALSLPASTV
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggtagaccaacctgcaactgaactgcctcgcactgctagacgcttacccaatcaacgc
tggcaaatagcaccagctaaaccagaattagcgcaaaaattggcatctagtctcgattta
tccccaattatcagccaattactcatcaatcggggtatggaatccccagaaactgcacaa
ctattcctcgatcctgaatccttagttttaccctcccccttagaagagttcccagattta
gcggtgagtgtggaattgttggaagaggcgatcactaatcaatctaaaatagctatttgc
ggtgactatgatgcagatggtatgaccagcaccgctttgttattgcggagtctccgcgct
ttgggtgctaaggttgattacgctattcctagtcgaatgcacgatggttatggcatcaac
aaacggattgtggaagaatttcacagcgaaggtgtcagactaattctcaccgtagataat
ggtatctcggcttttgaacccatcgctagggccagagaactgggtttacaagtcattgtc
accgaccatcacgacattcccccccaactacccccagctaatgccattctgaaccccaaa
ctcattgctgaatcttcaccttatcgaggaattgcaggtgtgggagtggcttatatttta
gctgtgtctttagcacagcaaatgggagaaaccaaaggcctaatttcacctatgttagcc
ttatttaccttgggaaccattgcagatttagcacctttaacaggggtaaaccgtcgctgg
gtgaaaagaggtttgaagctgttaccccaatcgaaattaccaggaatacaagcattaatt
caaattggtggagttcaacccggtgaagggggagagaaggtacaaaattccaagacctta
aaaccagaagatattggttttcgtttgggcccccgtattaatgccattggtagaatcggt
gatccacaaataatcatcgatttgctgaccactgatgattacggaattgcactcaccaaa
gccatgcagtgcgaacaaaccaatagtcaacgtcagcagatgtgtgaacaaatcgaacaa
gaagcgatcgctattgtcgaaaatttgtatgtacaatctctacaacgagacagagtgtta
gttgttgtccaagattattggcatcatggagtcattggtattgtggcttcccgcttagta
gaacgctatggtgtaccagtcttcattggcacttatgaacatgaaactgtgattcgcggt
tctgccaggggaattcctgagtttcacgtctttgaagccttacaagcttgccatgatttg
ttgggtaaatttggtggacacaaagctgcggggggattttctctaccagcgaccaattta
gaggcgtttcggtcgcggttgtgtgagtttgctcaatgtttacaaccccaacacctgaaa
ccattactgaaaattgatgctcaagctaatctcaatcacatcaatcagcacctttaccaa
cagctaaatattcttcatccctgcggtattgataaccccgacccgattttttggacaccc
aatgtgcaagtaatagaacagcaaatagtcggtaaaggtcacatcaaaatgactttagga
caaactatagagcatcatagatatgaaatcaaagcgatcgcttggcgatggcgtgactat
ttccccctgcctccacgagttgatatcgcctacaaactgcgagaaaatcactttaatggc
aacaccaccattgaaatggagttattaggtgtcagactgccccagcaatcaagtcaattc
ttctctcctacctctcacaagtcccgcgctacctttgagtacaatcaacgccaatatact
tgtggaatttacgacaacgaaggtaacacagaattaagagtcaaaaattctgaaggcaaa
gtcctggtcatgcagtcaggaaacttagtcggcttactgggcatcaatcgtcacgaagca
aaacatgtggatttatcacaaccaccttacgatggcattattcaggctgcttttcaagct
ttatctttaccagcatctaccgtataa
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