Richelia sinica: B6N60_02078
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Entry
B6N60_02078 CDS
T07308
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rsin
Richelia sinica
Brite
KEGG Orthology (KO) [BR:
rsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsin03016
]
B6N60_02078
Enzymes [BR:
rsin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B6N60_02078
Transfer RNA biogenesis [BR:
rsin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B6N60_02078
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QXE23388
UniProt:
A0A975T718
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All DBs
Position
2241439..2243487
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AA seq
682 aa
AA seq
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MEKGTLVEFRVQGDRRLGIVDRPDGKTRWFVVDERGQSHSLAPRQITYTVNGQTYKSTDI
PHFVSQVQPYLDPSSLEVAWELLVEDGETVTPSEMANLLFSEANPSQCYAAHCLLSDDKL
YFKQKGDAYEPRSATQVAERKHQIEVEAQKAKGQQEFLARVEQALKGEIVEWQRPDRQRL
EALEKYAALLADIVRMGVNYDSLARAYPPPAPVLETMNMLGRSATPQAAFQLLIDLGWWT
NHENLFLRRSSIPVQFPNKVLEVAQQRLDFPPHDLDANRLDLTNLKVYTIDDESTTEIDD
GLSWESLGEGRERLWVHIADPTRWLIPEDELDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLVQGRVCCALSFGVVLDTNGAVADYCIHPSIIKPTYRLTYEDVDEMLELGVQAEPEIA
AIANWATKRKTWRYAQGAISINMPEAMIKVKGDDINIDILDDSSSRQLVAEMMILAGEVA
ARYGQTHNIPLPFRGQPQPELPPEEELLQLPAGFVRACAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVLPFSAEQLKEVMMTVTTITQEVTMVERQT
NRYWALEYLRRHPDKAWEVTLLMWLREDSNLGLILLEDLGLQLPMSFRRTVKLGEQLLVK
VSIADPQKDIIQFQEIIYQEAI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttagggttcaaggcgatcgccgtctggggatagta
gatcgtccagacggaaagacccgttggtttgtggtagatgaacgaggtcaatcccacagc
ctcgcgccgcgacaaattacctatacagttaacggacaaacttacaaatctactgacata
ccccactttgtgagtcaagtccaaccataccttgacccatcaagcttggaagtagcctgg
gaattattggtagaagatggggaaacagtcacccccagtgaaatggctaatctgctgttt
tccgaagccaatccatcccaatgttacgcggctcattgcttgttatcagacgacaaactt
tatttcaagcagaaaggtgatgcttacgaaccacgcagcgctacccaggtagcagaacga
aagcatcaaattgaagtggaagcccaaaaagccaagggacaacaggaatttttggcacgt
gtcgaacaggcccttaaaggtgaaatagtagaatggcaacgacctgaccgtcagcgttta
gaagcactggaaaaatacgcggcgctactggcagacattgtgcggatgggagtcaactat
gattccttagcccgtgcctatcctccccctgccccagtgttagaaaccatgaatatgttg
ggacgttccgccacaccacaagcagcctttcagctgttgatagatttgggttggtggact
aaccatgaaaacctgttcttgcgccgttcatcaattcccgttcagtttcccaataaggta
ttagaagtggcgcaacaacgtttagattttccccctcatgacttagatgctaatcgtcta
gatttaactaatctcaaggtctataccattgacgatgaaagcactacagaaatagacgat
ggtctgagttgggaatctttaggggagggaagggaaagactgtgggtgcatattgccgac
ccaacccggtggttaataccagaagatgaattagatttagaagccagaaaacgggggagt
acagtttatttgcccacagggatgattcccatgtttcccgaagtgttggcgactggaccc
atgagtttggtacagggaagagtgtgctgtgccttgagttttggtgtggtgttagatacc
aacggggctgtagcggattattgtattcatcccagcattattaagcccacctatcgtctc
acctatgaagatgtggatgagatgttggaattaggggtacaggcagaaccagaaattgca
gcgatcgctaattgggcgactaaacgtaaaacttggcgctatgcccaaggagccatcagc
attaatatgccagaggcgatgattaaagtcaaaggtgatgacatcaacattgacattctt
gatgattcttcctctcggcaattagtagcagaaatgatgattttagctggagaggtggcc
gcacgttatgggcaaacccataacatccctctgcctttccggggacaaccccaaccagaa
ttacccccagaagaagaattactccaactaccagcagggtttgttcgtgcttgtgccatg
cgtcgctgtatgcccaagagtgaaatgagcattacacctgtacgtcatgctggtttaggt
ttagatacttacactcaagccacatcccccattcgtcgttacagcgatttacttacccat
tttcaactcaaagcccatttaagaggtgaagttttacccttttcagcagaacaactcaaa
gaggtgatgatgaccgtcaccaccattacccaagaagtgacaatggtggaaagacaaaca
aaccgctattgggctttagaatatttgcgtcgtcaccctgataaagcgtgggaagtgaca
ttgttaatgtggttgcgagaagatagtaatttagggctaattcttttagaagatttaggc
ttacaattgccgatgtctttccgtcgaactgtgaagttaggtgagcaattattggtgaaa
gtaagtattgctgacccgcagaaagacattatccagttccaggaaatcatttatcaagaa
gcaatttga
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