Richelia sinica: B6N60_03161
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Entry
B6N60_03161 CDS
T07308
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rsin
Richelia sinica
Pathway
rsin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B6N60_03161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsin03021
]
B6N60_03161
03400 DNA repair and recombination proteins [BR:
rsin03400
]
B6N60_03161
Enzymes [BR:
rsin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B6N60_03161
Transcription machinery [BR:
rsin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B6N60_03161
DNA repair and recombination proteins [BR:
rsin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B6N60_03161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
RPOC_hybrid
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
QXE24456
UniProt:
A0A975T904
LinkDB
All DBs
Position
complement(3385002..3388961)
Genome browser
AA seq
1319 aa
AA seq
DB search
MADKLKDLGFRYATKAGVSISVDDLMVPPSKRSLLEAAEEEIRATEARYQRGEITEVERF
QKVIDTWNGTSEALKDEVVTYFKQTNPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQ
GEIIDLPIKTNFREGLTVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIRE
IDCGTTRGLPLGAMTEGNKTLIKLSTRLMGRVVAADVVNPQTKEVIAPRNTPISDELALA
IEKAGVTEVMVRSPLTCEAARSVCQHCYGWSLAHAKMVDLGEAVGIIAAQSIGEPGTQLT
MRTFHTGGVFTGEVAQQVRSKVDGTVKIPRKLRTRSFRTRHGEDALYVETNGTLTIEGDK
TQGTGESQDIQVTQGSTLYVSEGRHVKAGQLIAEVAIGGRTTRANTEKAVKDVASDLAGE
VKFAEVVPEQKTDRQGNTTTTAARGGLIWILSGEVYNLPPGAELVVKNGDAVGTTGVLAE
TKLTTIHGGVVRLPEATPGKSTREIEIITASVVLDQATVTVQSSQGRNNYLVTTANNQAF
NLRATPGTKVQNGQVVAELIDDRYRTTTGGFLKFAGVEVAKKGKAKQGYEVVQGGTLLWI
PEETHEVNKDISLLLVEDGQFVEAGTEVVKDIFCQTSGVVEVTQKNDILREVVVKPGELL
MVDDPEAVMSLNDTFVHPGEEFQGSVVTELRYIQYVESPEGPALLSRPVVEFAVPNQPDV
PSTTTVSQQTGRSIQLRAVQRVPYKDSERVKSVEGVELLRTQLVLEIEQEGEQDHNASPL
AADIELVPDTQDPDIQRLQLVILESLIIRRDIAADATQGSTHTTLEVEEGMSIAPGSVVA
RTQILSKEGGIVRGVQKGTEAVRRCLVLRQNDLITIPINSPPQVKAGDLVVEGTPIATGV
FAAESGQIVEVKKGAGAQGSSGESALTAANSYTVTLRVGRPYRVSPGAVLQVEDGDLVQR
GDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEACVLARRSGEMKAVYGDGDEAIAIK
VIESNGVVTDYPLGPGQNLIVPDGAHILAGQPLTDGPSNPHEILEIFFSLGSEDGVYACA
SHALQKVQNFLVNEVQMVYQSQGIDIADKHIEVIVRQMTNKVRIDDGGDTTMLPGELVEL
RQVEQVNEAMAITGGARAQYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKSD
WLRGLKENVIIGRLIPAGTGYNTYDEPSTIDDYTTDLGSGVLDEVDDPLDMVLDDRTAKL
YNLDAPGLADGSYGGPSRRDTKSILDDDELIADEVRDFVDEDDEYEEVEEDDDDDFDDD
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagttaaaagacctgggcttccgttacgccaccaaagcgggggtgtctata
agtgtggatgacctgatggttcctccttccaagcgatcgctcctggaggcagcagaagaa
gaaattcgtgccacggaagctagataccaacgtggggaaatcaccgaagtagaacggttc
caaaaggtaattgatacttggaacggtacttccgaagctctcaaagatgaagttgtcacc
tatttcaaacaaaccaatcccctcaactccgtgtacatgatggccttctctggagcacgg
ggaaatatttcccaggtgcggcagttggtagggatgcggggactcatggcagacccccaa
ggggaaatcattgacttacccatcaaaaccaacttccgggaaggattaacagtaacggaa
tacattatttcctcctacggtgccagaaaaggtctagtagacaccgctctgcgaactgcc
gactctggttaccttacccgtcgtctggtggacgtttcccaggacgtaattattcgggaa
attgattgtggtaccaccagaggtttacctttgggagccatgaccgaagggaacaagact
ctgatcaaactctccacccgattaatgggcagagtcgtggcagccgatgtagttaatccc
caaaccaaagaagtcattgccccccgcaacacccctatttctgatgaactagccctagcc
attgaaaaggccggagttacagaagtaatggtgcgctctcctctgacctgtgaagcggcc
cgttctgtgtgccaacactgctacggctggagtctagcccatgccaagatggtagatttg
ggtgaagcagtggggattattgccgcccaaagtattggtgaaccaggtacacagttaacc
atgcgtaccttccacactgggggtgtgttcactggagaagtagcccaacaggtacgtagt
aaagtagacggcaccgtcaaaatccctcgcaaactcagaactcgcagcttccgcaccaga
catggggaagacgctctgtatgtagaaaccaacggtaccctgaccatagaaggggacaaa
acccaaggcactggcgagagccaagacattcaagtgacccaaggctccaccctgtacgtc
agcgaaggtagacatgtcaaggctggacagttaatagctgaggtggcaataggtggacgc
accaccagggccaacacagaaaaagctgtgaaagacgtagcttctgacctagcgggagag
gtgaaatttgctgaagtagtgccagaacaaaaaactgaccgtcaaggcaacaccaccacc
acagctgccagaggtggtttgatttggattttatcgggagaagtttataacctgcccccc
ggtgcagaattagtagtgaaaaatggtgatgccgtaggtactactggagtcctggcggaa
accaaattgaccaccattcacggtggggttgtccgtctcccagaagctacccctggcaag
agtaccagagaaattgaaatcattactgcttccgttgtgcttgaccaagccacggtgaca
gtccaaagttcccaaggacgtaacaactacctggtaacaacagccaacaaccaagccttc
aacctccgggctaccccaggtactaaggtacagaatggacaggtagtggcagaattgatt
gacgatcgctaccgtaccaccactggcggctttttgaaattcgctggtgtggaagtagcg
aaaaaaggcaaagccaagcaaggctatgaagtagtccaaggtggcacactgttgtggatt
cctgaagaaacccacgaagtcaacaaagacatttctctgctgctggtagaagacgggcag
tttgtagaagccgggacagaagttgttaaagacattttctgtcaaaccagtggggtagtg
gaagttacccagaaaaacgacattctgcgagaagtagtagtcaagcctggggaattgtta
atggtggatgacccagaggcagtaatgtctctcaacgacacctttgtccacccaggagaa
gaattccaaggtagtgttgtcaccgaactacggtacatccagtatgtggaatcaccagaa
gggccagccctgttgagtcgtcctgtagtcgaatttgccgttcccaaccagcctgatgtt
ccctccaccaccacagtcagccagcaaactgggcgctccattcagttgcgagcagtgcag
cgagtgccttacaaagactcagaacgagttaaatccgtagaaggggtagaactgctgcgg
actcaattggtgctggaaattgaacaggaaggcgagcaagaccacaacgcctcaccctta
gccgcagatattgaactggtgcccgatacccaagacccagacatccaaagattgcagtta
gtaatcttggaatccttgattattcgtcgggatattgccgctgatgccacccaaggtagc
acccacactaccctagaagtagaagaaggaatgagcatcgcccctggttctgtggtggca
aggacacaaatcctctccaaagaaggggggatagtcagaggtgtacagaaaggcacagag
gcggtacgacgttgtttagtgctacgtcaaaatgacctgatcaccatccccatcaatagc
ccaccccaagtcaaagccggcgacctggtagtagaaggtactcccattgctactggagta
tttgcggctgaatctggacaaatagtggaagtgaagaaaggtgcaggggcgcagggaagc
agtggagaatctgctttaactgctgccaattcttatactgttaccctccgagtcggtcgt
ccctatcgagtcagccctggagcggtgttgcaagtagaagatggggacttggtacaacgg
ggtgataacctggtgttgctggtatttgaaagagccaaaaccggggacattattcaaggt
ttgcccagaattgaagaactcctagaagcccggaaacccaaggaagcctgtgtgttggcc
cgacgttctggggaaatgaaagctgtctatggagacggtgacgaagcgatcgctattaaa
gtaatagaatccaacggagtagttaccgactatcctctcggccctggacaaaacctcatc
gttcctgatggcgctcatatcctcgctggtcagcccctcaccgatggcccctccaacccc
cacgaaatcctggaaatcttctttagcttaggctcagaggatggagtttacgcctgtgct
agtcacgccttgcaaaaggtgcaaaacttcttggtgaacgaagtgcagatggtgtatcag
tcccaaggtattgatattgccgacaagcacatcgaagtgatagtccggcagatgaccaac
aaagtccgcatcgacgatggtggtgacaccacgatgttacctggggagttggtagaactg
cgccaagtagaacaagtcaacgaagctatggctattactggtggtgctagggcccaatat
acccctgtgttactaggtatcaccaaagcatcgctgaacaccgacagtttcatctctgcc
gcttcattccaagaaaccaccagagtcctgacggaagcagccatagaaggtaaatctgac
tggttgcgtggtctgaaggaaaacgtgatcatcggacgcttgattcctgctggtacaggt
tacaacacctacgatgaacccagcaccatcgacgactacaccactgatttaggtagtgga
gtgttggatgaagttgatgacccattggatatggtgttagatgaccgcactgccaaactt
tataacctggatgctccaggcttggcagatggtagttatggcgggcctagtcggcgggat
accaagtcaattctggatgatgatgagttgattgctgatgaggtgcgtgactttgttgat
gaagatgatgagtatgaagaagtagaagaagatgacgatgatgattttgatgatgattaa
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integrated database retrieval system
