Richelia sinica: B6N60_04814
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Entry
B6N60_04814 CDS
T07308
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rsin
Richelia sinica
Pathway
rsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B6N60_04814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsin03019
]
B6N60_04814
03009 Ribosome biogenesis [BR:
rsin03009
]
B6N60_04814
Enzymes [BR:
rsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B6N60_04814
Messenger RNA biogenesis [BR:
rsin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B6N60_04814
Ribosome biogenesis [BR:
rsin03009
]
Prokaryotic type
rRNA helicases
B6N60_04814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXE26083
UniProt:
A0A975Y789
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All DBs
Position
5185475..5187004
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AA seq
509 aa
AA seq
DB search
MSLSFQELGISQERAEQLAKIGFTAPTNIQTQAIPQLLNGRDVVGQSQTGTGKTAAFSLP
ILERLDAGQRAVQALVLTPTRELAIQVHDAISQFVGNSGLRVLAIYGGQSIDRQILQLKR
GVQIVVGTPGRVIDLLERGSLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPTERQTA
LFSATMPPSIRMLVNKFLNSPVTVTVEQPKAAPTKINQVAYLIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTNQLQAAGHSVDEYHGDLSQQARERLLTRFRNRQVRWVVATD
IAARGLDVDQLSHVINFDLPDSVETYVHRIGRTGRAGKEGTAISLVQPFERRKQQAFERH
VRQNWQVLSIPTKAQIEARHINKLKEQVAEALTGERLASFLPIISELIEKYDAQAIAAAA
LQIAYDQTRPAWLQSGVDIPVEEVSSTPKPKIMKRRDGERTRSSWVKDGGSDEDRRSTPK
PKLRTNRREPSISGGNPKLGSQVARESAS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttcttttcaagagttaggtatttcccaagagcgtgcagaacaattagctaaa
attggttttactgcacctacaaatattcagacccaagccattccccaattactgaatgga
cgtgacgtagttggtcaatctcaaactggaactggtaaaaccgccgctttttccttgcca
attttagaaagattggatgcaggtcaaagagccgtgcaagcactggttttaacacccact
cgtgaattagcgattcaagttcatgatgccatcagtcaatttgttggtaactcaggctta
cgggtattagcaatttatggtggtcaatcaattgaccgccaaattctacaactcaagcgt
ggtgtacagatagttgttggtactcctggacgagtaattgatttgctagagcgtggtagt
ttaaagctggatcaagtcaagtggtttgtgttagatgaagctgatgaaatgttgagtatg
ggcttcattgacgatgtagaaaaaattctctctcaagcccccactgaacggcaaaccgct
ttattctccgccaccatgcccccatctattcgcatgttggtgaataagttcctcaattct
ccagtcactgtcacagtagaacagcccaaagctgcaccaaccaaaattaatcaggttgct
tatttaattcctcgtcattggacaaaagctaaagccctacaaccaattctggaaatggaa
gatccagaaactgctttaatttttgtgcgtacccgtcgtactgctgccgaattgactaat
cagttgcaagctgcgggacatagcgtggatgaatatcacggtgacttgtctcaacaagct
agagaacgtctgttaactcgcttccgcaatcgtcaggtgcgctgggtagtagctactgat
attgccgcacgaggtttagatgttgaccaactttcccacgtaatcaactttgatttacct
gatagcgtggaaacctatgttcaccgcattggtcggactggtcgggcaggaaaagaagga
acagcgatttccctggtgcaaccctttgaacgccgtaaacagcaagcctttgaacgccat
gtacgccaaaactggcaagtgctgtctattcctaccaaagcccaaattgaagccagacat
atcaataagttgaaggagcaggtagcagaagccctgacaggtgaaagactagcttccttc
ctccccatcatcagcgaattgattgaaaaatatgatgctcaagcgatcgctgctgcggct
ttacaaattgcttacgatcaaacccgtcccgcttggctacaatcaggtgtagacattccc
gtcgaggaagtttcctccacacctaagcccaagattatgaagcgtcgtgatggtgaacgt
acccgttcctcttgggtcaaagatggcggtagtgatgaagacagacgttccacacctaag
cccaaactacggactaaccgccgcgaaccttctatttctggtggcaatccaaaactaggt
tcacaggtagcgagagaatcagcatcttag
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