Rossellomorea sedimentorum: V1502_01405
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Entry
V1502_01405 CDS
T11221
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
rsj Rossellomorea sedimentorum
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsj03021
]
V1502_01405 (sigB)
Transcription machinery [BR:
rsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V1502_01405 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_23
Sigma70_r4_2
DUF1492
HTH_28
GerE
HTH_3
DUF134
HTH_37
KORA
IF2_N
NirdL-like_HTH
EF-hand_15
Motif
Other DBs
NCBI-ProteinID:
XNZ72414
LinkDB
All DBs
Position
269496..270293
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AA seq
265 aa
AA seq
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MPKLSQPNQQTKEQVKQWIKAFQEENDEEAQSNLVLHYENLVISIARKYSKGKSFHEDIV
QVGMIGLLGAIRRYDDSFGKTFEAFAIPTIVGEIKRFLRDKTWSVHVPRRIKELGPKIKS
TVEELTNTLERSPRVEEIADYIGVTEEEVLEAMEMGKSYQALSVDHSIEADSEGSTVTLL
DIVGSVDEGYERINQKLVLEKVLHVLSERERLIIQYTYLDNLSQKDAGEKLGISQMHVSR
LQRRAIKKLKEAIDAEMRNSESQSG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaactatctcaacctaaccagcaaaccaaagagcaggtaaaacaatggataaaa
gcatttcaagaagagaatgatgaggaagcacagagtaatctggtgctccactatgaaaat
cttgttatatccatagctcgtaaatattcgaaaggtaaatcctttcatgaggacattgtc
caggtcggtatgatcggtttgttaggtgccatccgccgctatgatgattccttcggtaag
acatttgaagcatttgccattcctacaatagtaggcgaaattaagcggttcctccgtgat
aagacatggagtgtccatgtgccgagaagaattaaagagttaggccctaagattaaatcg
actgtagaagaacttaccaatacattggagcgctcacctagagtcgaagaaatcgcggac
tacatcggtgtgacagaagaagaagtcctggaagcgatggagatgggtaagagttatcag
gctttatccgtggaccattccatcgaggctgattctgaaggtagtacggtcacgctgctt
gacattgtcggaagtgtggacgagggttatgaaagaatcaatcagaaacttgtcctggag
aaagtactgcatgttttatcagagagagaaagactcatcattcaatatacttatttggat
aacctcagtcaaaaggacgccggagaaaagctgggcatttcacaaatgcatgtatcgagg
cttcaaaggcgtgcgatcaaaaagctgaaggaagctatcgatgcagaaatgagaaattcg
gagagtcaatctggatga
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