Rossellomorea sedimentorum: V1502_01910
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Entry
V1502_01910 CDS
T11221
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsj Rossellomorea sedimentorum
Pathway
rsj03420
Nucleotide excision repair
rsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1502_01910 (pcrA)
03430 Mismatch repair
V1502_01910 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsj03400
]
V1502_01910 (pcrA)
Enzymes [BR:
rsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1502_01910 (pcrA)
DNA repair and recombination proteins [BR:
rsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1502_01910 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
V1502_01910 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
56B_RHH
Motif
Other DBs
NCBI-ProteinID:
XNZ72490
LinkDB
All DBs
Position
363346..365571
Genome browser
AA seq
741 aa
AA seq
DB search
MQFLTDRLLNGMNPQQAEAVKATEGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMKDRIGNILGGVAEEIWISTFHSMCVRILRRDIDRIGFNRNFTILDSTD
QLSVIKSILKDKNIDPKKFDPRSVLGSISSAKNELKTAEEFSKDAGSYFDNVVSDVYEEY
QKRLRKNQALDFDDLIMTTIQLFQRVPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKMMA
SRFQNLCVVGDSDQSIYRWRGADIANILSFEKDYPRANVILLEQNYRSTKTILHAANDVI
QKNSNRKPKNLWTENTQGEKITYYRGDSEQSEAQFVAGKIKEMTDSGKRKFSDFAILYRT
NAQSRVMEEILLKSNIEYSIVGGVKFYDRKEIKDILAYLRLIANPDDDISLRRVINVPKR
GIGSTSLDKIANYAAMNDLSMMQALEEADFIGLSPKITKSVIEFKDLVKGYTQMQEYLSV
TELVEEILEKSGYREMLKAEKSIEAQSRLENIDEFLSVTKSFEDSNDDKSLVAFLTDLAL
VADIDKLDDDEQPQDAVILMTLHAAKGLEFPVVFLMGLEEGVFPHSRSLMDEEEMEEERR
LAYVGITRAEEELFLTNAQMRTLFGQTKMNPVSRFIAEIPEDLIDNFEPEKRSPFSTGGA
AAASRTQQPARRKPVSRPVPTTTGGEGISWQVGDRAAHKKWGTGTVVSVKGSGDGMELDI
AFPSPTGIKRLLAKFAPVEKV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacagatcgattattaaatggaatgaatccgcagcaggcggaggcggtg
aaagcaacagaaggcccgctcttaattatggcaggtgcaggttcggggaagacccgtgtg
ctgacacaccgtatcgcctatctcatggttgaaaagggagtcaatccttacaacattctg
gcgattacttttacaaataaagcagcaagggaaatgaaagacaggatcggaaacatcctg
gggggagtagcagaggaaatttggatttccacttttcactcgatgtgtgtccggatttta
agacgtgacatcgaccgcatcggtttcaatcgaaacttcacaatccttgactccacggac
cagttatccgtcatcaagtcaatcctgaaagacaaaaacatcgacccgaagaaatttgat
ccaagatccgttctgggatccatttcatcagctaaaaatgaattgaaaacggctgaagag
ttttctaaagacgccggaagctattttgataatgtcgtctccgatgtgtatgaagaatat
cagaagcgtcttcgcaaaaaccaggccctcgactttgatgacctaatcatgacgacgatt
caattattccagcgtgtgcctgaagtacttgaattttatcaaagaaaatttcagtacatc
cacgtggatgagtatcaggatacgaatagagcgcagtatatgcttgtgaaaatgatggca
tcccgctttcagaacctttgtgtcgtcggggactccgaccagtcgatttaccgctggcgc
ggagcggatatcgcgaatatcctgtcttttgaaaaagattatccgagagccaatgtcatt
ttactagagcagaactaccgctcgaccaaaacaatcctgcatgcggccaatgatgtcatc
cagaagaactccaaccgtaagccgaagaacctctggacggaaaatacccagggtgagaag
atcacctattacagaggagacagcgagcagtcggaagcgcagtttgttgccggaaaaatc
aaagaaatgacggatagcggcaagcggaaattctccgatttcgccatcctttaccgtaca
aatgctcagtcccgtgtaatggaggaaatccttctaaaatccaatattgaatacagcatc
gtaggaggcgtcaagttctacgaccgtaaagagatcaaggatatcctggcctacttaagg
ttgatcgcaaaccctgatgatgatataagcttgcgccgtgtcatcaacgtaccaaaacgg
ggcatcggttcgacttctttagataaaatcgcgaattacgcagccatgaatgacctgtcc
atgatgcaggccttggaggaagctgattttatcggcttgagtccgaaaatcacaaaatcg
gtcattgaattcaaggatcttgtgaaaggttatacccagatgcaggaatacctttctgtc
acagagctggtagaagaaattcttgaaaaatccggctatagggaaatgctgaaagcggaa
aaatcgattgaagcacaaagcaggctcgaaaacatcgacgagttcttatctgttacaaag
agctttgaagacagcaatgacgataaatcactggtcgcattccttaccgatcttgcgctg
gttgccgatatcgataagcttgacgatgatgaacagccgcaggatgccgttatcttaatg
acgctgcatgctgcgaaaggactggaattccctgtcgtcttcctgatggggcttgaggaa
ggcgtcttcccgcacagccggtcacttatggatgaagaagagatggaggaagaacgccgt
ctcgcttatgtgggcatcacgagggcggaagaggagttattcctgacgaatgctcaaatg
agaacattattcggacagacgaaaatgaatcctgtctccaggttcattgcagaaattccg
gaggatctcattgataacttcgaacctgaaaagagaagcccgttttccacaggcggggca
gccgctgcttcaaggacacagcagccggcgagaaggaaacctgtttcccgccctgtacca
acgacaaccggcggagaagggatctcttggcaggtcggtgacagagcggcacataaaaaa
tggggtaccggcacggttgtcagcgttaaaggcagcggtgacgggatggaacttgatatc
gcgttccctagcccgacaggcatcaagcgcttattagcaaagtttgctcctgtcgaaaaa
gtttaa
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