Rossellomorea sedimentorum: V1502_04790
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Entry
V1502_04790 CDS
T11221
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsj Rossellomorea sedimentorum
Pathway
rsj03420
Nucleotide excision repair
rsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1502_04790 (helD)
03430 Mismatch repair
V1502_04790 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsj03400
]
V1502_04790 (helD)
Enzymes [BR:
rsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1502_04790 (helD)
DNA repair and recombination proteins [BR:
rsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1502_04790 (helD)
MMR (mismatch excision repair)
Other MMR factors
V1502_04790 (helD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNZ73029
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Position
977787..980057
Genome browser
AA seq
756 aa
AA seq
DB search
MTNETHNHPDLPKEKDRLEFTKRYIDVVIQTAQTSKDQFKENIENAFGDVDWLESSAAYI
DILTNASFFEMSKEELEALQKAKKKPYFARIDFKHDESSEEERHYIGKTSLYQRENQEQI
IVDWRSPIATLYYEGRIGDVSYEAEDETYHGHLSLKRQYMIEDGRLEEIRDIDLTTTDEL
LQESLSKSSSNRLTEIISTIQEEQNRIIRADLNKPIIVQGAAGSGKTTIALHRISYFIYN
YKQHFDPRQLMILAPSRLFIDYISEALPELGVEKVRQTTFSEYVMTCLEKELKLAEDNKL
IRLIENTDDEAKQAAWISGWKGSRDFRKILDAYIADIESRFYPTEDFVIDKYRLFSAKKF
TSLLKEDYTYMPIYRRVEKLKLLLQSYVRSNKKMMVDKVEKFFDDKIEKALYHKKYAANR
KEYISKALDKKDERMQEIQKAIRTGLSQYMKQFEKKTLIQYYQELFSDWDKLVEYGNGGL
SGQQAREICEYTLKRLKRKTFEMEDLAPLLYLQTALYGVDSFYKAKNVVIDEAQDYSYMQ
LYALKTALQTDMFTLVGDLAQGIHSYRGLESWEPVYREIFPRATYTELQKSYRTTIEIMD
EANKLLKKLPNEFPEVNPVVRHGDKPEFYSYEKEEELVESLSDLIRGLREEEDFQTFAVI
GKTMRDCEKIAALLETEFTGGVKLLAEQESIPKDRIVVVPSYLSKGLEFDVVVIASVDEQ
YKEENELDIKLLYVGMTRPLHRLYFFGKCKSDFLLN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgaaactcacaatcaccccgatttaccaaaggaaaaagacagactcgaattc
acgaaacgctacatcgatgtcgttatacaaactgcccaaacaagcaaagaccagttcaag
gaaaatatcgaaaacgccttcggtgatgtcgattggctggaatcgtccgcggcttatatc
gatattctgacaaacgccagcttttttgaaatgtcaaaagaggagttggaagcgcttcaa
aaggcaaagaaaaagccctattttgcccggatcgacttcaagcatgatgaatcatccgaa
gaagaaaggcactatattgggaagacgtcgctctatcagcgtgaaaaccaggaacagatc
atagtagattggcggtcacccattgcaaccttgtactatgagggacggataggtgacgtt
tcctatgaggcagaagacgaaacttaccatggccacctgtccttaaaaagacagtatatg
attgaggatggccgcctggaggagattcgtgatattgacttgaccaccaccgatgaactg
cttcaagagtcgctttcgaaaagctccagtaaccgattgactgaaattatttccaccatc
caggaagaacagaacaggattatccgggccgatctgaataagccgatcattgtccaggga
gcggctggaagtggaaagacaaccattgcacttcaccggatttcctattttatctacaac
tacaaacagcatttcgaccctcgccagctcatgattcttgcaccaagcagactgttcatc
gattacatttcggaggctctgcctgaactcggagtggaaaaagtgcggcagacaacgttc
agtgaatacgttatgacttgtttggaaaaagagctgaaactggcggaagataacaaactg
atccgcttgatcgaaaacacggatgatgaagccaaacaggccgcctggatatcaggttgg
aagggctcaagggatttccgaaagattctagacgcctatattgccgatattgaaagcaga
ttttatccgactgaggactttgtcatagacaagtaccggctattctctgcgaaaaaattc
acttctcttttaaaagaggattatacgtacatgcccatttacagaagagtggagaagttg
aagcttctgttgcagagttatgttcgatccaataaaaaaatgatggttgataaggtagag
aagttttttgacgacaagattgaaaaggccctctaccataagaaatatgcagcgaaccgg
aaggaatacatctccaaagcgctggataaaaaagatgagcgcatgcaggaaatccagaaa
gcaattcgcaccggtttgtcccagtacatgaaacagtttgaaaagaaaacgctgattcaa
tactatcaagaattattttccgattgggataaacttgtggagtatggaaatggcgggctt
tccgggcaacaggcaagggagatatgtgaatatactctgaaaaggttgaaaaggaaaacg
tttgaaatggaagaccttgcaccgcttctctatttacagaccgctctttacggtgtggat
tctttttataaagccaaaaacgtcgtcatcgatgaagcccaggattacagttatatgcag
ctgtatgcgctgaaaacagccctgcagacagacatgtttacccttgtcggcgacctggcc
caaggcatacattcgtaccgggggctggagtcttgggaacctgtgtacagggagatattc
ccgcgtgcgacttatacggagctgcaaaaaagttataggacaaccattgaaatcatggat
gaagcgaataaacttttaaaaaaacttcccaatgagtttcctgaagttaatccggtagtg
aggcacggtgataagccggaattctattcctatgaaaaggaagaagaattagtagaaagc
ttgtccgatctgattagaggtttgagggaagaagaagactttcagacatttgcggtaata
ggaaagacaatgagggattgtgaaaaaatagcagctctgttggagacggaattcactggc
ggggtcaaactgctggcagaacaggaaagcattccgaaagacaggatcgttgttgttcct
tcttatctatcaaaaggcctcgaattcgatgttgtcgtcatcgcttctgttgacgaacag
tataaagaagaaaacgagcttgatataaagctcctttatgtggggatgacccgaccgctg
caccggctgtatttcttcgggaaatgcaaatccgattttctattgaactag
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