Rossellomorea sedimentorum: V1502_05305
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Entry
V1502_05305 CDS
T11221
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rsj Rossellomorea sedimentorum
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsj03019
]
V1502_05305 (yhaM)
Messenger RNA biogenesis [BR:
rsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V1502_05305 (yhaM)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Coat_F
Motif
Other DBs
NCBI-ProteinID:
XNZ73128
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All DBs
Position
1077153..1078094
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AA seq
313 aa
AA seq
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MPGIAQYDVGASVDLFMLIKQTTKGTTNTGKPFLTLILQDKSGDIEAKLWDASEQDEINY
QPETIVKVSGDVQSYRGKNQLRIRQIKPSSSADGLELSDFLQTAPLSIDEMTSKITQYIF
EMKNPNIQRVTRHLLKKYQKPFLEYPAATKNHHEFVSGLAYHVVSMLDLSKSIASLYPSL
DTDLLYASVILHDLGKVFELSGPTSTSYTIEGNLLGHISIMVNEIGKAAEELGIKGEEIM
ILQHLVLSHHGKAEWGSPKPPMIREAEILHYIDNIDAKMNMLDKVLEKTKPGEYTERVFA
LDNRSFYKPTFHK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaatcgcacaatacgatgtcggagcatcagtggatttattcatgctgatcaag
cagacgacaaaaggaacgacaaatacaggtaaaccatttttaactctgattcttcaagac
aaaagcggagatatcgaagcaaaactttgggatgcaagcgagcaggacgaaatcaactat
cagccggaaacaatcgtaaaggtttccggagatgttcaaagctacaggggaaaaaaccag
cttagaatcaggcagatcaaaccgagttcttctgcagatggtttggaattaagcgatttc
cttcaaactgcacctttgagcattgatgaaatgaccagcaaaatcactcaatacattttt
gaaatgaaaaatccgaacatccagagagtcacgcgccaccttttaaaaaaatatcaaaaa
ccattcttggagtatccggctgcaacaaagaatcatcacgaatttgtatcaggattagcc
taccatgtcgtgtcgatgctggatctgtctaagtccattgcatctttgtatccatccctt
gatacagacctcttatatgccagtgtcattctccatgaccttggaaaggtgtttgaacta
tcaggaccgacttcaacctcctacaccatagaaggcaacctgctcggacatatttccatc
atggtcaatgaaatcggaaaggccgctgaggaactcggaatcaaaggggaggaaatcatg
atccttcaacacctcgtcctctctcaccatggaaaagcagagtggggaagcccgaagccg
ccgatgattagagaagcggaaatccttcattacatcgataatatcgatgccaaaatgaat
atgctcgataaagttctggaaaaaacaaagccgggagaatacacggagagagtgtttgct
ctcgataaccgttcattctacaagccgactttccataagtaa
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