Rossellomorea sedimentorum: V1502_05585
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Entry
V1502_05585 CDS
T11221
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rsj Rossellomorea sedimentorum
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsj03400
]
V1502_05585 (addB)
Enzymes [BR:
rsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1502_05585 (addB)
DNA repair and recombination proteins [BR:
rsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V1502_05585 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
XNZ73182
LinkDB
All DBs
Position
1130107..1133595
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AA seq
1162 aa
AA seq
DB search
MSVRFILGRAGTGKTNMILNEIKEKLRQEPNGSPVIYLVPDQMTFLSEYNLVNEEGINGM
IRAQVYSFTRLAWRILQETGGLNRYHLSNIGLNMLIRKIIDDKKDQLKLFSKASDKAGFI
EHVEVMLTEFKRYCISPEELSEKQEGWGERGQESKALADKLHDLQLIYESFEENLSGKYI
DSEDYFTLLEESIGKADFLKDAEIFIDGFHSFTPQEYAVVGKLMDHCPRVTIALTAEPDF
GSEQNDLFRMTSETYENLLQLAMASRGKVEDKVVLGETSRFQNKGLQHIEANFEKRPVLP
FEDESGMNIIEASNRRAEIEGVAREIRRLARTENYRYKDMAVLVRNGQEYQDIIETVFYD
YDIPYFIDQKRKMLNHPLIELIRSTLEIMNSNWRYEPVFRAVKTDLLFPYDRNPQQLREK
MDKLENYVLAYGIQGDKWTKKDRWIYRRFRGLEQADMPQTDKEREMEREINELRLFISAP
ILRFGRRLKKGKTGQDLCEILYLYLEELDIPAKLERLRLEAENRGDIISAREHDQAWNAV
MDLLDQFVEILGDEEVTMKKFASIIDAGIESMRFSLVPPAVDQVMIANLEQSRLSDLKAA
FVIGVNDGVLPAKITEDGIFSDEDREKLGASGLTIAPGSKTRLLDEEFIAYKAFTTPSER
LYVSYPIANEEGKALLPSPYIKRLSELCPQSEISLLVNDPSELPKNEQLSYVCHPNVTIS
YLTSGLQAKKRGYHLEDFWWDAYNYYVSDSVWKGRARHILSSLFYQNKGKKLTEATSQEL
YGEEILASVSRMELFHGCPFSHFANHGLKLRERDIYRLEAPDIGDMFHAALKWISEEIDK
HGLSWKQLTKTQCLELAREAVLSLAPKLQHQILLSSNRHHYIKKKLQDVIGRASLILSEH
AKASGFAPVGLELGFGPKAELPPFAFTLKNGTKMALQGRIDRVDKAESDEGVYLRIIDYK
SSARDLDLTEVYYGLSLQMLTYLDIVLTHSRKLIGAEADPAGVFYFHVHNPMVNSKKILT
LEEIEEEIFKSFKMKGLVLGETDVVRMMDQSLESGSSNIISAGLKKDGTLSSKTKSADRT
QFDVMRSHVRNLYKKSGNDIMSGRTDIAPYKLKDRTPCQYCAFKPVCQFDTSLEENEYRL
FTEDKPADLMEKMKGERDAHES
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcagatttattttgggacgagccggaacaggcaaaaccaatatgattttgaat
gaaatcaaagaaaagctgagacaggagccaaatggcagtcctgtcatctatcttgttcca
gaccagatgacatttctttctgaatacaatttggtgaacgaagaagggataaacgggatg
atccgggcgcaggtttacagttttacaaggcttgcatggagaattctgcaggaaacagga
ggtcttaatcgctatcacttatcaaacatcggtcttaacatgctgatccgtaaaataatc
gatgataaaaaagatcagttgaaattattttcaaaggcctcggataaagcaggctttatt
gagcatgtagaagtgatgcttaccgagtttaagcgatactgtatctcaccggaagaactg
tcagagaaacaggaaggctggggagagcgcgggcaggaatccaaggcattggcagacaag
cttcatgacctgcagctcatctatgaaagctttgaagaaaacctgtcaggaaagtacatc
gattcagaagattattttactctattggaagaatcaatcgggaaggccgatttcctaaaa
gatgctgaaatttttatagatggcttccacagttttacaccgcaggaatatgcggtggtt
ggaaaactgatggatcattgtccaagggtgacgattgcccttacggcagagcctgacttc
gggagcgaacaaaacgatttgttcaggatgacttctgaaacctatgagaacctgctgcag
cttgcgatggcctccagaggaaaggttgaagacaaggttgtactcggggaaacgagccgc
ttccagaacaaagggcttcaacatatcgaggcgaattttgaaaagcggcctgtattgccg
tttgaggatgaatccggaatgaacattatagaggcctccaaccgcagggctgaaattgaa
ggggtggcaagggagattcggcgccttgcccgaacagagaattatcgttataaggatatg
gctgtccttgtgcgaaatggtcaggagtatcaagatatcattgaaacggtattttatgat
tatgacattccctactttattgatcagaaacgaaaaatgcttaatcatccgctgattgaa
ctgattcgttcaacacttgaaatcatgaatagcaattggcgctatgaacctgttttccgg
gcagtcaaaacggatcttctgtttccgtatgaccgtaatccccagcagctgagggaaaag
atggacaagctcgaaaattatgtccttgcttatggaatacagggagataaatggacaaaa
aaggatcgctggatttatcggagattccgcggcctggaacaggctgatatgccgcagaca
gacaaagaaagagaaatggagcgggagatcaatgagcttcgcttgtttatctctgcaccg
atcctgcgattcggcaggcgtttgaaaaaggggaagaccggacaagacctgtgtgaaatt
ctttacctttatctagaggaactagatatccctgcaaaactcgaacggcttcgtcttgaa
gcggagaaccgcggtgatatcatctctgcaagagaacatgatcaggcctggaatgccgtg
atggatctgctggaccaatttgtcgagatcttgggtgatgaggaagtcacgatgaaaaag
tttgcttccatcattgatgccggaattgaatcaatgaggttctctttggtccctcctgct
gtggatcaggtcatgattgccaatcttgaacaatcaaggctctcagacctcaaggcggct
tttgtaattggtgtaaatgatggcgtccttccggcaaaaatcactgaggatggaattttt
tcagatgaggacagggaaaagcttggggcatcaggattaactattgcacccggcagcaag
acccgcctgcttgatgaagagttcattgcctataaggcattcacgacaccatccgaaagg
ctttatgtttcttatccaattgcgaatgaagagggaaaagcccttctgccgtctccctat
attaagagactgtctgaactgtgcccgcagtcggaaatcagtcttctggtcaatgatccg
tctgaattgccgaaaaatgaacagttatcctatgtctgtcatccaaatgtaacgatttcc
tatctgacttctgggcttcaggcgaaaaagcgaggctatcatctggaagatttttggtgg
gatgcgtataactattatgtctcggattcggtgtggaaaggacgcgccagacatatactt
tcaagcttgttttatcaaaataaaggtaaaaaacttacagaagcaacaagccaggagttg
tatggggaagaaatattggcaagtgtctcaaggatggaactgttccacgggtgtccgttc
tctcattttgccaaccatggattaaaacttcgcgaacgggatatttatcgcctggaagca
ccggatatcggggatatgttccatgcagcccttaaatggatctccgaggaaattgataaa
catggactatcatggaaacagctgaccaaaacacagtgcctagaattggccagggaagcc
gttttatcattggcgcccaagcttcagcaccagattttgctcagctcgaaccgccatcat
tatataaagaagaaactgcaggatgtcatcggcagagcttccctgattttgagcgaacat
gccaaagcaagcggctttgctcctgtgggccttgaattggggtttggcccgaaagcggaa
ctgccgccgtttgcctttacattgaaaaatggcacaaagatggccctccaaggcaggatt
gacagggtggataaagcggagagcgatgaaggtgtctatctgcgaatcatcgactataag
tcaagtgcgagagaccttgatcttactgaagtgtactatgggttgtctctgcaaatgctg
acatacctggatatcgttttgacgcattcacggaagttgattggggcagaagccgatccg
gcaggggtattttacttccatgtccataacccgatggtcaatagcaaaaagattctcaca
ctcgaagaaatcgaagaggagattttcaaaagctttaaaatgaagggactggtattggga
gaaaccgatgtcgtcaggatgatggaccagtcattagagtcaggaagttccaatatcatt
tctgcaggattgaaaaaagacggaacgttgtcatctaagaccaaatcggcagaccggacc
cagtttgatgtgatgcgctcgcatgtaaggaacctgtacaagaaatccgggaatgacatt
atgtccggaagaacggatatcgctccatataaattaaaagacagaacgccttgtcaatat
tgtgcgttcaaaccggtttgccagtttgatacttcattggaagaaaacgaatatcgtctt
tttacagaggacaaaccggcagatttaatggaaaagatgaaaggagaacgagatgcccat
gaatcataa
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