Rossellomorea sedimentorum: V1502_07235
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Entry
V1502_07235 CDS
T11221
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rsj Rossellomorea sedimentorum
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsj03032
]
V1502_07235 (topA)
03400 DNA repair and recombination proteins [BR:
rsj03400
]
V1502_07235 (topA)
Enzymes [BR:
rsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V1502_07235 (topA)
DNA replication proteins [BR:
rsj03032
]
Prokaryotic type
DNA Topoisomerases
V1502_07235 (topA)
DNA repair and recombination proteins [BR:
rsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V1502_07235 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
XNZ73494
LinkDB
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Position
1487382..1489457
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVRASMGHVRDLPKSQMGVDVEHDFNPKYITIRGK
GPVLKELKTAAKKAKRIYLAADPDREGEAIAWHLAHSLDMDVNSECRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIKEFKPEEYWTIQAEFKKGKNTFQGAFYGLDGNKLDLKTEKEVNNILEKIKGDSFEIKK
VTKKERKRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIEIGKEGTVGLITYMR
TDSTRISEVAQKEASEYITDKYGSEYTKSQERKEKKGQKAQDAHEAVRPTSTLRDPASMK
EYLSRDQLRLYKLIWERFVASQMASAVMDTMSVDIVNGDVYFRANGSKVKFPGFMKVYVE
GSDDGKEEKENQLPALEEGDLVSYEEVDPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVSLDNKRFIPTELGEIVSELVSEFFPDIIDVEFTANMERDLDYVEDGK
ERWVNIIDQFYKGFEKHLEKAEEEMEKVEIKDEPAGEDCESCGHPMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPECDDGNIIERKSKKKRIFYGCDQYPNCEFLSWDKPIDRKC
PKCEHLLIEKKLKKGVQVQCSNCDYKEETQQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacttagtgattgttgaatcgcctgcaaaggccaaaacaatcgagagatat
ttaggaaagaaatataaggtccgagcttctatggggcatgtccgtgacttgcccaaaagc
caaatgggtgttgatgtcgagcacgatttcaatccaaagtacatcaccatccgcgggaag
ggacctgtcttaaaagagttgaaaacagccgcgaaaaaagctaaaagaatatacctggcc
gccgaccccgacagagaaggggaggcaattgcatggcatcttgcccacagtctggacatg
gacgtcaactcggaatgcagggtggtatttaatgaaatcaccaaagatgccatcaaggaa
tcatttaagcatcccagaccgataaatatggatcttgttgatgcccagcaggccagaagg
attttagacaggctggtcggttataatatcagtccgctactatggaaaaaggtaaaaaaa
ggacttagtgcaggccgggttcagtctgtagcggtaaggctgattattgaccgggagaaa
gaaataaaagaatttaagccggaagaatactggaccatacaggcggaattcaaaaaaggc
aaaaataccttccagggtgccttctatggcctcgatggaaataagctcgacttaaaaaca
gaaaaagaagtaaataacattctcgaaaagattaaaggtgactcttttgaaattaaaaaa
gtgaccaaaaaggaaagaaagcggaatcctgcagctccgttcactacttcatcccttcag
caggaagctgcaagaaagctgaatttcagggcaaagaaaacaatgatgcttgcacaacag
ttatatgaaggaattgagatcggcaaagaaggaactgttggactgatcacctatatgaga
accgattctacccggatttctgaagttgcccaaaaagaagcttcagagtatataactgat
aaatatggcagtgagtacacaaagagccaggaaaggaaagagaagaagggacaaaaggcg
caagatgcccacgaggctgtccgtccaacttcgactcttagagacccggcttccatgaag
gaatacctatccagagaccagcttaggctttataagctgatttgggaacggtttgttgca
agccaaatggcttcggctgtcatggatacaatgagtgtggatattgtcaacggagatgta
tatttccgtgcaaatggctcgaaagtgaaattcccgggctttatgaaggtatatgtggag
ggttctgatgatgggaaggaagaaaaggaaaaccagcttcctgccttggaagaaggagac
ctcgtcagttatgaagaggttgatcctaagcagcatttcactcagcctcctccgcgttat
acagaagccagattagtaaagaccttggaggagctgggcatcggccgtccatcaacatat
gctccgactttggacacaatacaacgaaggggatatgtcagcctcgacaataaacgattt
attcctactgagcttggggaaatcgtctcggagttggtatctgagttcttccctgatatc
attgatgtggaattcaccgctaatatggaacgagacctggactatgtggaagacggaaag
gaaagatgggtcaatataatcgaccagttctataaagggttcgaaaaacaccttgaaaaa
gccgaagaagaaatggaaaaagtggaaattaaagacgagccagcaggggaagattgtgaa
agctgcggacatccaatggtattcaagatgggacgctatgggaaattcatggcgtgcagc
aattttcctgactgccggaacaccaaaccgattgttaaggaaataggtgtaaagtgccct
gaatgcgatgatgggaatatcatcgagagaaagagtaagaagaagcgtattttctacgga
tgcgatcaatatcctaactgtgaattcctgtcctgggacaaaccgattgacaggaaatgc
cctaaatgtgaacatctattaattgagaagaaattgaagaagggcgtccaggtgcaatgt
tcaaattgcgattataaagaagaaacgcaacagtaa
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