Rossellomorea sedimentorum: V1502_07420
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Entry
V1502_07420 CDS
T11221
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
rsj Rossellomorea sedimentorum
Pathway
rsj02020
Two-component system
rsj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V1502_07420
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V1502_07420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsj03021
]
V1502_07420
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rsj02035
]
V1502_07420
Transcription machinery [BR:
rsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V1502_07420
Bacterial motility proteins [BR:
rsj02035
]
Flagellar system
Flagellar assembly proteins
Stator
V1502_07420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
UPF0122
DUF6272
Motif
Other DBs
NCBI-ProteinID:
XNZ73531
LinkDB
All DBs
Position
1521563..1522318
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AA seq
251 aa
AA seq
DB search
MSQPSTVEEQKYWELWKKSKDPHAGDMLVKKYLPLVSYHVQRISVGLPKNVSRDDLKSLG
LMGLLDALEKFDPSRDLKFDTYASFRVRGSIIDGLRKEDWLPRSTREKAKKIEAKIESLE
QELLRHVTPEEIAQEMQMEEGEVYQTMNEYFLANVLSIDEQLSDEENDGQHSFSIKDDQT
IMPEGQLVKNENISELTDTIRSLSEKEQMVLSLFYYEELTLTEIGEVMSLSTSRISQIHS
KAIFKLRKLLA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccctctactgtggaagaacaaaagtattgggaactatggaaaaaatccaaa
gacccgcatgctggagatatgttggtcaaaaaatatctgccgcttgtttcttatcatgtc
caaaggatttcggtgggcctgcctaaaaatgtttcccgtgatgacttgaaaagcttgggc
cttatgggcctgcttgatgcattggaaaaattcgacccatctcgggatctaaaatttgac
acttatgcttcgttcagagtaaggggatccattattgatggcctgagaaaagaagattgg
ctcccccgctccacaagggaaaaggcgaagaaaattgaagcaaaaatcgaatcacttgaa
caggagttgctccgtcatgtaacacctgaggaaattgctcaggaaatgcagatggaggaa
ggggaagtatatcagacgatgaatgaatactttttggccaatgtactgtcgattgatgag
cagctctccgatgaagaaaacgatggccagcattctttttctattaaagacgatcagaca
atcatgcctgaaggacaattggtcaagaatgaaaatatctctgaattgacagataccatc
cgatcactatcagaaaaagaacagatggtgctcagcctgttttattacgaagagctgact
ctcacagaaatcggggaagtcatgagtttatctacttcgagaatatcccagattcactcc
aaggcaatcttcaagcttcgtaaattacttgcctga
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