KEGG   Rossellomorea sedimentorum: V1502_07575
Entry
V1502_07575       CDS       T11221                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rsj  Rossellomorea sedimentorum
Pathway
rsj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    V1502_07575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsj03019]
    V1502_07575
Messenger RNA biogenesis [BR:rsj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     V1502_07575
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 CopK
Other DBs
NCBI-ProteinID: XNZ73560
LinkDB
Position
1558620..1560287
AA seq 555 aa
MSKKKNESIKIIPLGGVGEIGKNMYVIEVDEEIFVIDAGLMFPEDEMFGIDMVIPDIQYL
VENKERVKGIFLTHGHEDAIGAITYVLRKIKAPVYGTKLTNALVKGRLKDEEFKEDIKFY
NVHSDSKLYFEGVDVTFFRTTHSIPDSVGVSINTSEGSIVHTGEFKFDQAAKGLYRPDMG
KMAKIGDNGVLCLLSDSTEAERPGYTTSEEVIANQLNSAFHAAKGRIIVASYASNLIRIQ
QVFDAAYKNNRKVAVVGKSLERVYEIALNLGYLKIKDDVIIPIQDISKYNEDEIVVIATG
DQGEPFEALQKMAKQNHKLLNIQDGDSVFITATPSHGMELTMAKTVDMLYRSGAHVLTAN
KKVHVSGHGSQEDLKLMLNLMKPKYFIPIQGEYRMLIAHSKVANSVGISHNRVFILDKGD
VAQYKDGKMKMSGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTISRRGKTL
ISGPEIISRGFVYVRESEKLMDESTQLVKQIVDGYLAKGTFEWSNIKQDIRDQLNHLLFG
KTRRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttgagcaagaaaaagaatgaaagcattaagatcattcccctcggaggagtgggggagata
ggcaagaatatgtatgtaatagaagtggatgaggaaatcttcgtcatcgatgcagggctc
atgttccctgaagatgaaatgttcggtattgatatggtcataccggatatccagtatcta
gtggaaaacaaagaacgtgtgaaaggaatattccttactcatggtcacgaagatgcaatt
ggtgcgataacgtacgttcttagaaaaattaaagcccctgtctatggcacaaagttgaca
aatgctttggtaaaaggaaggcttaaggatgaagaattcaaggaagatatcaaattttat
aacgtccactctgacagtaagctgtattttgagggagtcgatgtaacattcttcaggaca
acccacagcatccccgattctgtcggagtcagcattaatacttcagaaggatccattgtc
catacgggagaatttaagtttgaccaggcggctaaaggtctgtaccgcccggatatgggc
aaaatggcgaagatcggggacaatggggtgctttgtctgctgtctgacagtacggaagca
gaaagacctggatatacaacatcggaggaagttatcgccaatcaattgaattcagctttt
catgcggcaaaaggcagaatcatcgtggcgagctatgcttccaatttgatcaggattcag
caggtttttgatgcggcctataaaaataatagaaaagtagcggtcgtcggcaaaagcctt
gaaagagtgtacgaaattgctttgaatcttggatatctcaagatcaaggatgatgtcatc
attcctatccaggacatttcgaaatacaatgaagatgaaatcgttgtcattgctactggc
gatcaaggggagccatttgaagcactgcagaaaatggctaaacaaaatcataaactttta
aatatccaggatggggattccgtcttcataacggctacaccttcacatggaatggaactt
acaatggctaaaacggtggacatgctataccgttcaggtgcacatgtcctgacagcgaat
aagaaagttcatgtttccggacatggcagccaggaagatttgaagctcatgctgaacctg
atgaaacctaagtacttcattccgattcaaggtgagtacagaatgctgattgcccacagc
aaagttgccaattcggtcggcatttcccataacagggtattcattcttgataaaggggat
gtagctcaatataaagatggaaagatgaagatgagcggcagggttcaggcaggaaacgtc
ctcattgacggaataggtgtcggtgatgttggcaacatcgtcctgcgtgacagaaagctg
ctttctcaagacggtatttttattgtcgttgtgacaataagccgcagaggaaaaacactg
atttccggtcctgaaatcatttcccgcggatttgtatatgtccgcgagtcggaaaaactg
atggatgagtccacacaactcgtaaaacaaatcgtcgatggttacctggcgaaaggaacc
tttgaatggtccaacatcaagcaggatatccgtgatcaattaaaccatcttctattcggc
aaaactagaagaaggccaatgatcctgccaatcatcatggaagtataa

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