Rossellomorea sedimentorum: V1502_07665
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Entry
V1502_07665 CDS
T11221
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
rsj Rossellomorea sedimentorum
Pathway
rsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1502_07665 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsj03019
]
V1502_07665 (rny)
Messenger RNA biogenesis [BR:
rsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V1502_07665 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
FUT8_N_cat
OmpH
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
XNZ73577
LinkDB
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Position
1580819..1582381
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AA seq
520 aa
AA seq
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MMELITIISILLGLIVGVVVGYFIRKSIAEAKIAGAKGSAEQILEDAKREAEALKKEKLL
EAKDENHKLRTDMENDLRERRNELQKQENRLMQKEENLDRKDETLDKRESQLERKEAALN
ERQQHIEEMESKVDEMIRLQQTELERISALTRDEAKAIILDRTENELSHDIALMVRENET
RAKEESDKKAKEILSLAIQRCAAEHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALEKLVQDGRIHPARIEEMVDKARREVDEHIR
EIGEQTTFDVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLSGLLAAELGEDVTL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVISVLV
AAADALSAARPGARSETLENYIRRLEKLEDISESYEGVEKSFAIQAGREVRIMVKPESID
DLEAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatggaactcattacaatcatctccattttgcttggcctaatcgtcggtgtagttgtt
ggatattttattcgtaaatccattgctgaagcaaagattgcgggagctaaaggttctgca
gagcagattcttgaagatgcaaagcgcgaggcagaagctctgaagaaggaaaagctctta
gaagcaaaggatgaaaatcataagcttcgtactgatatggaaaatgaccttcgtgaacga
agaaatgaattgcaaaagcaggaaaatcgtttaatgcaaaaagaagagaaccttgaccgc
aaagatgaaacgctcgataagcgtgaatctcagctggaaagaaaagaggctgctctaaac
gaaagacaacaacatattgaagagatggaaagcaaagtggacgagatgatacgactacag
cagaccgaactggaacgcatctctgcacttacgcgtgatgaggcaaaagcgattatcctc
gaccgtactgagaatgaactttctcatgatatcgccttgatggtcagagaaaatgaaact
cgtgcgaaagaggagtctgacaagaaagcgaaagaaattctttcacttgcaatccagcgt
tgtgcagcagaacacgttgcagagacgacggtatctgttgtaaaccttccgaatgatgag
atgaaaggtcgcatcattggtcgtgaaggacgtaatattcgtacattagaaacgcttact
ggaatcgatttaattattgatgatacgccagaagcggttatcttatccgggtttgatcca
attcgacgtgaaactgcaagaattgcgcttgaaaagctggtacaagacggacgtatccat
ccagcccgtatcgaagaaatggtcgataaagcaagacgggaagtggatgaacatatccgt
gaaattggtgaacagacaacatttgatgttggggttcatgggctccatccagatttaatc
aagattctaggtcgattgaaattccgtacaagctatggtcaaaacgttttgaagcactca
atggaagtggcattcctttcaggattgctggctgcagagttgggtgaagatgtaacgctt
gcccgtcgtgccggattgctgcatgatatcggtaaggcgattgaccatgaagtggaagga
agccacgtagaaatcggtgttgaattagctaccaagtataaggaacatccggttgtcatc
aacagtatcgcttcccaccacggtgatacggaaccaacatccgtcatttcagtacttgtc
gctgcagctgatgcactttcagccgcaagaccaggtgccagaagtgaaacacttgagaac
tatatccgccgtttggaaaagcttgaggacatctctgaatcctacgagggtgttgagaag
tcatttgctattcaagcaggtagagaggttcgtatcatggtgaagccagaatcaattgat
gatctggaagctcaccggttggcacgtgacatccgtaaacggattgaagaagaactggat
tatccaggccatatcaaagtcacggtcatacgggaaacaagagcggttgaatacgcgaag
taa
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