Rossellomorea sedimentorum: V1502_08210
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Entry
V1502_08210 CDS
T11221
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rsj Rossellomorea sedimentorum
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsj03400
]
V1502_08210
DNA repair and recombination proteins [BR:
rsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1502_08210
Archaeal homologous recombinant proteins
V1502_08210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
Snapin_Pallidin
SMC_N
ABC_tran
RapH_N
Motif
Other DBs
NCBI-ProteinID:
XNZ73676
LinkDB
All DBs
Position
1695744..1698878
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AA seq
1044 aa
AA seq
DB search
MRPLKLTMQAFGPYPSAETIDFQLLGHRTMFVISGKTGAGKTTIFDGISFAIYGKASGED
RSGNDLRSQFASEEDLTEVSLTFSLRGKTYHITRSPQQEKKKARGEGFTTVTAKAEFYAM
DENGNKQLLAANVRDVDEKIKEIIQLDANQFRQILMIPQGEFRKLLTSDSKDKEGILQRL
FHTEFYKTIQDRLKEESDLLKRDVEKAIEDRTRRLLGIHPEQNEELRDLLLQEPLNDHMI
LEKLELHNGMMEDKLSQLNQHYEDKQKERDQLQAQLIQAQKLVEQFEKRRVLREEKRSLE
RKHEEIERLKIEIKKAYQADKLVQQDEYCHRLSRELKAVEHELEKLLAEQQELSVKMGKA
REDWEKEQKKEEVRNEAAKKVNTLEGLREDVYSLGQLEDEVRSLDTKRTQLNNAISRTSE
ELKTKKLLLEEQERKKAALENLRIESYQLEKEIAQVQSEEKLLEQLQKLQIETRGLESEL
LKRKGQHQSASQEVKDARSTLTWLEDKWNKAQAGILASQLVENNPCPVCGSEHHPNLAHV
QDDLPDEKDIKAAKEMVMVKEKRENEAGRAFYEVEARHATVLNQKQEALKEIEQNREGFN
EEELDLEVSTINNTLTKKNEQLKEFSIQLKELDSLVKRIEETKAELVEQEKRQEKLKNEE
LSLSEAFHAKKGALESRWTAIPAEIRTREKFNAALEKAQDELSALKASFEKAQDLYNTLV
KKVSVNEAQVKDKQKSATRLRAEMEEERNKFLQILEEQGFENYKSFHDAKRTESEINSMN
NVVTSYGEEVRSVRDRLEELEKTRQDIEEPQLERLQMSFKEINEDLKKLNEEYNSLKMRI
SENQSILEYVRSLNKQMKELEERYSIAGHLAEMARGQNAHRLTFERYVLASFLEDILLVA
NDRLLKMTSGRYRLIRKKDRSKGNVQSGLELLVFDQYTGQERHVKTLSGGESFKAALSLA
LGLADVVQQYAGGVSLETMFIDEGFGTLDPESLDHAIEALMDIQSSGRLVGLISHVPELK
ERIDARLEVIASQHGSTTEFHFLA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaggccattgaagttaacaatgcaggcattcggaccttatcctagcgccgaaactatt
gactttcagcttcttggacataggactatgtttgtcatatctggtaagacaggtgccggc
aagacaactatttttgatggaatatcctttgcgatttatgggaaggcatccggtgaagac
agaagcggcaatgatcttcgcagtcaatttgcgagcgaagaggatctgacggaagtatct
ctgaccttttcactacgaggaaaaacgtatcatattacccgctctcctcaacaggaaaag
aaaaaagcgcgcggagaagggttcacgacggtcacggcgaaggcagagttttatgccatg
gatgaaaatggaaataaacagcttctggcagcaaatgtccgtgatgtggatgaaaagatt
aaagaaatcattcaactcgatgctaatcaattcagacagatcctaatgatcccacaaggg
gagttcagaaagctgttgacctcagacagtaaggataaagaaggcatactgcagagattg
tttcataccgaattctataagactattcaagatagattaaaagaagaaagcgaccttttg
aaacgggatgtggaaaaagccatcgaagatagaaccaggcgacttctgggcatacatccg
gaacaaaatgaggaactgagagaccttcttctgcaagagcctttgaatgatcatatgatt
ttggaaaagctcgagcttcataacggtatgatggaagataagctgtctcaattgaaccaa
cactatgaagataagcagaaagagagggatcagcttcaagcgcagctgattcaagctcaa
aaactagtagaacaatttgagaaaagaagagtgctgcgcgaagaaaagcgatctcttgaa
cgtaagcatgaagaaattgagcgtttgaaaatagaaattaaaaaagcttaccaagcggat
aaactggtccaacaagatgaatattgccacaggttaagccgcgagttaaaggctgtcgag
cacgaattagaaaaactcctggctgaacagcaggagctctccgtcaagatgggtaaagcc
cgtgaagactgggagaaagaacagaaaaaagaagaggtaagaaatgaagcagccaagaag
gtcaatacactagagggattgagagaagatgtatactcactcggccagctggaggatgaa
gtcaggagcctggatacaaagaggactcaactgaataacgccatcagccgaacatccgag
gagttaaaaacaaaaaaactccttcttgaggaacaagaaagaaaaaaagctgcattagaa
aatttacgtattgagtcataccaattagaaaaagaaattgcacaggttcaaagtgaggaa
aaattgttagagcagctgcaaaagttacagattgagacgagaggtttggaaagtgagctg
ttgaaacgtaaggggcagcaccaatctgcatctcaagaagtcaaggatgcccgctcaacc
ttaacctggcttgaggacaaatggaataaagcgcaggccggaatactcgcctcccagctt
gttgaaaacaatccttgtcctgtgtgcgggtcagaacatcatcccaatctggctcatgtt
caggacgacctgccggatgaaaaggatatcaaggcagcaaaagaaatggtgatggtaaaa
gaaaaacgtgaaaatgaagcaggcagggctttttatgaagttgaggccagacacgcgacc
gtccttaatcaaaaacaagaagccctaaaagagatcgagcaaaatcgcgaggggtttaat
gaggaagaacttgacttagaagtctctacaataaacaatacccttacgaaaaaaaatgaa
cagttaaaagaattcagcatacaattgaaggagctggactcacttgtcaaaaggatagaa
gaaactaaagccgaactggttgagcaagagaagaggcaggaaaagcttaaaaatgaagag
ctttccttatctgaagccttccatgcaaaaaagggtgcgttagaaagcaggtggacagcc
atcccggcagaaatacgcacaagggaaaaattcaacgccgctttagaaaaggcacaggat
gaactgtctgcattgaaagcttcctttgaaaaagcgcaggatttatataatacattggta
aaaaaagtttctgtcaatgaagctcaggtaaaagataaacaaaaatcggccaccaggctt
cgagcagaaatggaggaagaaaggaataaattcctccaaatccttgaagagcagggattt
gaaaactataaatcttttcatgacgcgaagagaactgaatctgagatcaattcaatgaac
aatgtggtcacaagttatggtgaggaagtccgctctgtccgtgacaggctggaagagctg
gaaaagacgcgtcaggatatcgaagaaccgcagcttgaaagattgcagatgagtttcaaa
gaaataaatgaagatttgaagaaactgaatgaagaatataattccttgaaaatgagaata
tctgaaaatcagtccatcctggaatatgtccgcagccttaacaagcaaatgaaggaattg
gaagaaaggtacagcatcgctggccatcttgcagaaatggcaagagggcaaaatgctcac
cgtctgacctttgagcgatatgtgctggcttcattcttggaggatattctgttggtagca
aacgacaggctgttgaagatgacatcaggaaggtacaggctgatccgtaaaaaagatcgt
agtaaaggtaacgttcaaagcggcttggagctgctcgtctttgatcaatacacgggacag
gaacggcatgttaagaccctttcaggcggtgagagctttaaagcggcattatcgctggca
ttaggattggctgatgttgttcagcaatatgctggtggggtttccctggagacaatgttt
attgatgaagggttcggtactctcgatcccgagtctcttgatcatgctattgaagcctta
atggatattcaaagcagcgggcgtctcgttggactcatctcacacgtacctgaattaaaa
gagagaatcgatgcccgtcttgaagtaatcgcatcacagcacggaagtaccacagagttt
cattttttagcatga
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