Rossellomorea sedimentorum: V1502_09600
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Entry
V1502_09600 CDS
T11221
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rsj Rossellomorea sedimentorum
Pathway
rsj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V1502_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsj03400
]
V1502_09600
Enzymes [BR:
rsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V1502_09600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V1502_09600
DNA repair and recombination proteins [BR:
rsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V1502_09600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNZ73940
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Position
complement(1973125..1973937)
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AA seq
270 aa
AA seq
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MPELPEMENYKNLLSERIQNKLITDVEVGREKSINVSVDEFTQLVKNRTLKKVTRRAKHL
LFHLDNDVVLLLHLMLGGWMFFGSEQDKPDRTIQIRISFENQHLYFIGLRLGYLHLYKGF
EEAAIELEDLGPEPLSPPFSVEQFLDLAAKRRGSLKTTLVNQQFLSGIGNCYSDEICFHA
GLLPQRKFNEVSEHEIRQLFQSMQFILKDAANSGGYMEQPLFTGDTLTGGYNTKCRVYDR
EGEPCSRCGSPIIKDEISSKKTFYCANCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgagatggagaactataagaatcttttgtcggagcgtattcaaaac
aaactgattactgatgtagaggtcggcagggaaaagtcgataaatgtttctgtagatgaa
tttacacaacttgttaaaaaccgcacattaaaaaaagtgacaagacgagcaaagcacttg
ctgtttcatctcgataatgatgtagtattattattacacttgatgctcggcggctggatg
tttttcggcagtgagcaagacaagcctgacagaaccattcaaatacgtatttcttttgaa
aatcagcatttatattttattggcctgagacttgggtatttacatctatataaaggattc
gaagaggcagcgatagaattggaagatctcgggcctgaacctttaagccctccattctcg
gttgaacaatttttggatttggctgcgaaacgcaggggcagtttaaaaacaacattggtg
aatcaacaatttctttctggtatcggtaattgctattctgacgaaatctgctttcatgca
ggactgctgccccagcggaaattcaatgaagtttccgaacacgaaatccgccagcttttc
cagtccatgcaattcatattaaaggatgctgcaaacagcgggggatatatggaacaacct
ttatttaccggtgacactctcactggcggctacaataccaagtgcagggtttatgaccgg
gagggtgagccgtgcagccgatgtggaagtcccatcattaaagacgaaatctcatcaaag
aaaacattctattgcgctaattgtcaaaagtaa
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