Rossellomorea sedimentorum: V1502_19500
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Entry
V1502_19500 CDS
T11221
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rsj Rossellomorea sedimentorum
Pathway
rsj00260
Glycine, serine and threonine metabolism
rsj00460
Cyanoamino acid metabolism
rsj00630
Glyoxylate and dicarboxylate metabolism
rsj00670
One carbon pool by folate
rsj00680
Methane metabolism
rsj01100
Metabolic pathways
rsj01110
Biosynthesis of secondary metabolites
rsj01120
Microbial metabolism in diverse environments
rsj01200
Carbon metabolism
rsj01230
Biosynthesis of amino acids
rsj01240
Biosynthesis of cofactors
rsj04981
Folate transport and metabolism
Module
rsj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V1502_19500 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V1502_19500 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V1502_19500 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V1502_19500 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V1502_19500 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V1502_19500 (glyA)
Enzymes [BR:
rsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V1502_19500 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
HTH_70
Motif
Other DBs
NCBI-ProteinID:
XNZ72005
LinkDB
All DBs
Position
complement(3992525..3993763)
Genome browser
AA seq
412 aa
AA seq
DB search
MSKIAAQDQELYQAIQDELHRQQTKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEHVDVAENLARDRAKEIFGAEHANVQPHSGAQANMAVYFTVLEQGDTVLGMNLSHG
GHLTHGSHVNFSGIQYNFVEYGVDKDKQVIDYDDVRQKALEHKPKMIVAGASAYPRQIDF
AKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPHADFVTTTTHKTLRGPRGGMILCKE
EFAKKIDKSIFPGIQGGPLMHVIAAKAVAFGEALHDDFKTYAQNVIDNAKRLGESLVKEG
MQLVSGGTDNHLLLIDLRSMNLTGKVAEKVLDDIGITTNKNTIPFDPESPFVTSGIRIGA
AAVTSRGFGLEEMDEIASIIAFTLKNQDDEEKMKEASKRVEELTAKFPLYKK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagattgcagcacaagatcaagagttataccaagctattcaagatgaattgcat
cgccagcagacgaaaatcgaactgattgcttcagaaaacttcgtaagtgaagctgttatg
gaagcacaaggctcggtgttgaccaataaatatgcagaaggctacccaggccgtcgctat
tatggcggatgtgagcatgtcgatgttgctgaaaaccttgcgcgtgaccgtgcgaaggag
atttttggtgcagagcatgccaatgtgcagcctcactccggtgcgcaggcaaacatggcg
gtttacttcactgttttagaacagggagatacagtccttggaatgaacttgtcgcacggc
ggccacttgactcacggaagccacgtgaacttcagcggaattcaatataacttcgtcgaa
tacggagtagataaagacaagcaggtcatagactatgatgacgttcgccaaaaagcccta
gaacataagccgaaaatgattgttgctggcgcttcagcgtacccaagacaaatcgatttt
gccaagttccgcgaaatcgcggatgaagtaggagcttacttaatggtcgatatggctcac
atcgccgggcttgttgcagctggacttcacccgaatcccgttccgcacgcagatttcgtt
acgactactacgcacaaaacacttcgcggcccgcgcggcggtatgattctttgcaaagaa
gaatttgcgaagaaaattgataagtctatcttccctggaattcagggtggaccattgatg
catgtcatcgctgctaaagctgttgcgttcggcgaagctctgcatgacgattttaaaaca
tacgcgcaaaatgtcatcgacaatgcaaaacgactgggtgaatctcttgttaaagaaggg
atgcagctggtatcaggcggaacagataaccacttactgctgatcgaccttcgttccatg
aaccttacaggaaaagtagctgagaaggtactggatgacatcggtatcacgacaaacaaa
aatacaattccgttcgatcctgaaagtccctttgtaacgagtggtatccgcattggtgct
gcagcggtaacttcccgagggttcggtcttgaagagatggacgagattgcttcaatcatc
gcctttacccttaagaaccaggacgatgaggagaaaatgaaagaagcaagcaagcgagtg
gaagagttgactgctaaattccctctttataaaaaataa
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