Cereibacter sphaeroides KD131: RSKD131_0038
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Entry
RSKD131_0038 CDS
T00844
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RSKD131_0038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsk03021
]
RSKD131_0038
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_0038
Enzymes [BR:
rsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSKD131_0038
Transcription machinery [BR:
rsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RSKD131_0038
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RSKD131_0038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
Motif
Other DBs
NCBI-ProteinID:
ACL99897
UniProt:
B9KLB5
LinkDB
All DBs
Position
1:30397..31413
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AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLVVKPGADPARVATVIAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSIKMEVEGPKRLSISAKGPGVVTAGDISE
SNGIEILNKDHVICHLDEGADVFMELTVNTGKGYVAADKNRPEDAPIGLIPIDAIYSPVK
KVSYEVTPTREGQVLDYDKLTMRIETDGGLTPDDAVAYAARILQDQLSIFVNFEEPESAT
RHDVEDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEDLAKRFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggccgagctgatcaagccgacgcagctggtcgtcaagccgggt
gccgatccggcccgggtcgccaccgtgattgcggagccgctcgagcgcggcttcggtctg
acgctgggcaacgcgctgcgccgcgtgctgctctcgtcgcttcagggggccgccatcacc
tccgtccagatcgacaacgtgctgcacgagttctcgtcggtggccggtgtccgtgaggat
gtgaccgacatcgtcctgaacctgaagggcgtctcgatcaagatggaggtcgagggtccg
aagcgtctgtcgatctccgccaaagggccgggcgtcgtcaccgcgggcgacatctcggaa
tcgaacggcatcgagatcctgaacaaggatcatgtcatctgccacctcgacgagggggcg
gacgtgttcatggagctgaccgtgaacaccggcaagggctatgtcgcagcggacaagaac
cgtcccgaggatgcgccgatcggccttattccgatcgacgcgatctattcgccggtgaag
aaggtgagctacgaagtcacgccgacccgcgagggccaggtgcttgactatgacaagctc
accatgcggatcgaaaccgacggcggtctgaccccggacgatgccgtggcctatgccgcg
cgcatcctccaggatcagctgtcgatcttcgtgaacttcgaagagccggaatcggccacc
cgccacgacgtggaggacgggctcgaattcaacccgctgctcctcaagaaggtggacgaa
ctcgaactgtcggtccgctcggcgaactgcctcaagaacgacaatatcgtctacatcggc
gatctcatccagaagaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctcaacgagatcaaggaagtgctctcgggcatgggtctgcacctcggcatggatgtcgag
gactggccgccggagaacatcgaggatctggccaagcgcttcgaagaccagttctga
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