Cereibacter sphaeroides KD131: RSKD131_0270
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Entry
RSKD131_0270 CDS
T00844
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rsk
Cereibacter sphaeroides KD131
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsk03016
]
RSKD131_0270
Enzymes [BR:
rsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RSKD131_0270
Transfer RNA biogenesis [BR:
rsk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RSKD131_0270
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACM00130
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All DBs
Position
1:264994..266151
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AA seq
385 aa
AA seq
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MQTITTTEALAAFCEAAKAEPYVTIDTEFLRERTYWSKLCLIQMALPGKTGEAVLVDPIE
GPDMSLEPLYDLFRHEATVKVFHAARQDLEIFFVEGRAFPVPLFDTQVAAMVCGFGEQVG
YETLVKKIAREQLDKTSRFTDWSRRPLSDAQKTYAIADVTHLRVIYEWLSAQIEKNGRQK
WVEEELAILTDPETYTVRPEEAWLRIKTRTTSGRFLAVVKELARFREDYAQKNNVPRSRV
MKDDALLEIASTRPTNSEELGRSRLLLREGRRGDIADGILAAVKAGMEVKNEDLPKPDLS
REQLQVNPALADLLRVLLKAKSESLGVAARLIASASELDAIAAGERDLPSLKGWRLEAFG
ADALRLCRGEIALSAKGNDVRVVKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccatcaccaccaccgaggcgctggccgccttctgcgaggccgccaaggccgaa
ccctatgtcacgatcgacacggaattcctgcgcgagcgcacctactggtccaagctctgc
ctgatccagatggcgctgccgggcaagaccggcgaggcggtgctggtggaccccatcgag
gggcccgacatgtcgctcgagccgctctacgacctcttccgccacgaggcgacggtgaag
gtcttccatgccgcccggcaggatctcgagatcttcttcgtcgaggggcgcgccttcccc
gtgccgctcttcgacacgcaggtcgcggccatggtctgcggcttcggcgagcaggtgggc
tacgagacgctggtcaagaagattgcgcgcgagcagctcgacaagacctcgcgcttcacc
gactggtcgcgccgtccgctcagcgacgcgcagaagacctatgccatcgccgatgtgacc
cacctgcgggtgatctacgaatggctttcggctcagatcgagaagaacggccggcagaag
tgggtcgaggaagagctcgcgatcctcaccgatcccgagacctacacggtccggcccgaa
gaggcctggctcaggatcaagacccgcaccacctcggggcgcttcctcgccgtggtgaag
gagcttgcccgtttccgcgaggactatgcgcagaagaacaacgtcccgcgctcgcgcgtg
atgaaggacgatgcgctgctcgagatcgcctccacgcggcccacgaattccgaggagctg
ggccgctcgcgacttctgctgcgcgaggggaggcggggcgacatcgccgatggcatcctt
gccgcggtgaaggcgggcatggaggtcaagaacgaggatctgccgaagcccgatctctcg
cgcgagcagcttcaggtgaacccggcgctggccgatctgctgcgggtgctgctcaaggcc
aagtcggaaagtctgggtgttgcggcgcggctcatcgcctcggcctccgagctcgatgcc
attgccgcgggcgaacgcgatctgccctcgctcaaaggctggcggctcgaggcgttcggc
gcagatgcgctgcgcctctgccggggcgagatcgccctgtcggccaagggcaacgacgtg
cgcgtggtcaagctctga
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