Cereibacter sphaeroides KD131: RSKD131_0391
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Entry
RSKD131_0391 CDS
T00844
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSKD131_0391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_0391
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSKD131_0391
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSKD131_0391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
AAA_19
AAA
Kinesin
AAA_16
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ACM00251
LinkDB
All DBs
Position
1:373714..375897
Genome browser
AA seq
727 aa
AA seq
DB search
MPHNNTNLPMHRPEVLTRPKLEGGRRFEMKTPFQPAGDQPTAIAELAAGVQGGEQNQVLL
GATGTGKTFTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQP
EAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDLIVGESYDQRQVIAELVAQQYRRNDQAFQRGSFRVRGDSLEVWPAHLEDRAWRFSFFG
EELESIVEFDPLTGAKTDSFKQIRIYANSHYVTPRPTMQQAIQGIKRELRQRLDQLVNEG
KLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVTVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAA
WELEQAGGVFAEQVIRPTGLLDPVVEIRPVEMQVDDLLDEIRRVAAAGLRVLVTVLTKRM
AEDLTEYFHEQGIRIRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPECGLV
AILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMERALRETERRREKQIAY
NIEHGITPQTVRKNVEDVLSGLWQGDTDQSRVTAKVDKPMVGANLAAHLDGLRVSMRKAA
ENLEFEEAARLRDEIKRLEAVELAIADDPLARQTAVEEAAEAAVKSSGRSTAGRAGQRGG
NKRRRGH
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacaacaatacgaacctgccgatgcaccgtcccgaggtgctgacccgcccgaag
ctcgaaggcggtcggcgtttcgagatgaagaccccgttccagcccgcgggcgaccagccc
acggccattgccgaactggccgccggggtgcaggggggcgagcagaaccaggtgctgctc
ggggcgacgggcaccggcaagaccttcacgatggccaagatcatcgaggagacccagcgc
ccggcaatcatccttgccccgaacaagacgctggcggcgcagctctacggcgagttcaag
ggcttcttccccgacaatgccgtggaatatttcgtctcctactacgactactaccagccc
gaggcctatgtggcgcgctcggacacctacatcgagaaggaatcgcagatcaacgagcag
atcgaccggatgcgccactcggccacccgggcgctgctcgagcgcgacgacgtcatcatc
gtggcctcggtctcctgcatctacggcatcggctcggtcgagacctattcggcgatgacg
caggatctgatcgtgggcgagagctacgaccagcggcaggtgatcgcggaactggtggcg
cagcaataccgccgcaacgaccaggccttccagcgcggcagcttccgcgtgcggggcgat
tcgctcgaggtctggcctgcccacctcgaggatcgcgcctggcgcttctccttcttcggt
gaagagctggagagcatcgtcgagttcgatccgctgaccggcgccaagaccgacagcttc
aagcagatccgcatctatgcgaattcgcactatgtgacgccgcgcccgacgatgcagcag
gccattcagggcatcaagcgcgagctgcgccagcggctcgaccagctggtgaacgagggc
aagctcctcgaggctcagcggctggagcagcgcacgaacttcgacctcgagatgctggaa
gccaccggcgtctgcaacggcatcgagaactactcgcgctacctgacgggccgcgcaccg
ggcgaaccgccgccgacgctgttcgaattcatccccgacaatgccatcgtcttcgccgac
gagagccacgtcaccgtgccgcagatcggcggcatgtatcgcggcgactatcggcgcaag
ttcacgctggccgaacacggtttccgattgccctcctgcatggacaaccggccgctcaag
ttcgaggaatgggacgcgatgcgcccgcagtcggtcttcgtctcggccacgcccgccgcg
tgggaactggagcaggcgggcggcgtcttcgccgagcaggtgatccggcccacggggctt
ctcgatccggtggtcgagatccgccccgtcgagatgcaggtggacgacctgctggacgag
atccgcagggtcgcggccgcgggcctgcgcgtcctcgtcacggtgctgaccaagcgcatg
gccgaggatctgacggaatatttccacgagcagggcatccgcatccgctacatgcactcg
gacatcgacacgatcgagcggatcgagatcctgcgcgacctgcggctcggcgccttcgac
gtgctggtggggatcaacctcctgcgcgaggggctcgacatcccggaatgcgggctggtg
gcgatcctcgatgcggacaaggagggcttcctgcgctccgagacctcgctgatccagacc
atcggccgcgcggcacggaatgcggacgggcgcgtcatcatgtatgccgaccggatcacc
ggcagcatggagcgcgcgttgcgcgagaccgaacggcggcgcgagaagcagatcgcctac
aacatcgaacatggcatcacgccgcagaccgtgcgcaagaacgtcgaggatgtgctgtcg
ggcctctggcagggcgataccgaccagagccgcgtcacggccaaggtcgacaagccgatg
gtcggggcgaaccttgcagcccacctcgacgggctgcgtgtctcgatgcggaaggcggcc
gagaacctcgagttcgaggaggcggcgcggctgcgcgacgagatcaagcggctcgaggcg
gtggaactggccattgccgacgatccgctggcgcgccagacggcggtcgaggaggcggcc
gaggccgcggtcaagagctcgggccgcagcacggccggccgcgcgggccagcgcggcggc
aacaagcgccgccggggccactga
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