Cereibacter sphaeroides KD131: RSKD131_0512
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Entry
RSKD131_0512 CDS
T00844
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk00071
Fatty acid degradation
rsk00280
Valine, leucine and isoleucine degradation
rsk00310
Lysine degradation
rsk00362
Benzoate degradation
rsk00380
Tryptophan metabolism
rsk00410
beta-Alanine metabolism
rsk00640
Propanoate metabolism
rsk00650
Butanoate metabolism
rsk00907
Pinene, camphor and geraniol degradation
rsk00930
Caprolactam degradation
rsk01100
Metabolic pathways
rsk01110
Biosynthesis of secondary metabolites
rsk01120
Microbial metabolism in diverse environments
rsk01200
Carbon metabolism
rsk01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RSKD131_0512
00650 Butanoate metabolism
RSKD131_0512
09103 Lipid metabolism
00071 Fatty acid degradation
RSKD131_0512
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RSKD131_0512
00310 Lysine degradation
RSKD131_0512
00380 Tryptophan metabolism
RSKD131_0512
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RSKD131_0512
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RSKD131_0512
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RSKD131_0512
00930 Caprolactam degradation
RSKD131_0512
Enzymes [BR:
rsk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RSKD131_0512
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RSKD131_0512
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RSKD131_0512
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
Pyr_redox_2
2-Hacid_dh_C
NAD_binding_8
DFP
TrkA_N
Sacchrp_dh_NADP
FAD_binding_3
XdhC_C
F420_oxidored
RS_preATP-grasp-like
NAD_Gly3P_dh_N
Shikimate_DH
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ACM00372
LinkDB
All DBs
Position
1:complement(506359..508560)
Genome browser
AA seq
733 aa
AA seq
DB search
MTDFTSRTDADGVCTITWDVPGKSMNVMSMAGFAELDGLIAAALDDPSVKGVILTSGKKD
FAAGMDLNVIARMKEEGGDDPARAVFEGVMEMHAVLRRIERAGMDPKTLKGGKPIVAALP
GTALGLGLELPLACHRIIAADNPKAKIGLPEIMVGIFPGGGGTTRLVRRLGAMMAAPLLL
EGKLNDPRGAKAMGVVDEVVPADQLLARAKEWVLGAKDSDLVKPWDAKGYKMPGGAPYHP
AGFMTFVGASAMVTGKTMGVYPAAKGLLAAVYEGALVPFDTALKIEARWFTHVLMNPSSS
AMIRSLFINKEALEKGAVRPALPDQSVRKLGVIGAGMMGAGIAHVAANAGIEVVLIDATQ
EAADRGKSHSEGLLDKGMKRGKVSAEKKAEVLGRIAATTDYAALSGCDLIVEAVFEDPGV
KAEVTQKVEAAVGPDCIFATNTSTLPISGLAKASRDPAQFIGIHFFSPVDKMMLVEIIRG
KATGDRAVAKALDFVRQIRKTPIVVHDARFFYANRCIIPYLNEGIRMVAEGVAPALIENA
AKLVGMPLGPLQLVDETSIDLGVKIAKATKAALGEAYPDAAVDAVIFPLADEGRLGRKAG
AGFYAYDAAGKRDGLWPGLADRWPLAETQPELAEVQHRLLFAQVLEAVRALEEGVLTDIR
EGDVGAILGWGFAPWSGGPFSWLDMIGAPRAVEICEGLAERHGPRFAPPKLLVEMAGKGE
SFYARFAPQARAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcaccagccggaccgacgcggacggggtctgcaccatcacctgggacgtg
cccggcaagtcgatgaacgtcatgtcgatggcgggctttgccgagctcgacgggctgatc
gccgcggcgctcgacgatccgtccgtcaagggcgtgatcctcacctcgggcaagaaggac
tttgccgcggggatggatctcaatgtcatcgcccgcatgaaggaggaaggcggcgacgat
ccggcccgggccgtgttcgagggcgtgatggagatgcatgccgtcctgcgccggatcgag
cgcgcgggcatggatccgaagacgctgaaggggggcaagcccatcgtggcggcgctgccc
ggcacggccctgggcctcgggctcgaactgccgctggcctgccaccgcatcatcgcggcc
gacaatcccaaggccaagatcggcctgcccgagatcatggtagggatcttccccggcggc
ggcggcacgacgcggctcgtccgcaggctcggcgccatgatggcggcgcccctcctcctc
gagggcaagctgaacgatcccaggggcgccaaggccatgggggtcgtcgacgaggtggtg
ccggccgatcagctgctcgcgcgggcgaaggaatgggtgctcggcgccaaggactcggat
ctggtgaagccgtgggacgccaagggctacaagatgcccggcggcgcgccctaccatccg
gcgggcttcatgaccttcgtcggcgcctcggccatggtgacgggcaagacgatgggggtc
tatccggcggccaagggcctgctcgccgcggtctacgagggcgcgctcgtgcccttcgac
accgcgctgaagatcgaggcgcgctggttcacccatgtgctgatgaatccctcctcgtcg
gcgatgatccggtcgctcttcatcaacaaggaggcgctggagaagggcgccgtccgccct
gccctgcccgaccagtcggtccggaagctgggcgtgatcggcgcgggcatgatgggggcg
ggcatcgcccatgtcgcggccaatgcgggcatcgaggtcgtgctgatcgacgcgacgcag
gaggcggccgatcgcggcaagtcccattcggaaggtctcctcgacaaggggatgaagcgg
ggcaaggtctcggccgagaagaaggccgaggtgctgggccggatcgccgccaccaccgac
tatgcggccctctcgggctgcgatctgatcgtcgaggcggtgttcgaggatcccggcgtg
aaagccgaggtcacgcagaaggtcgaggccgcggtcgggcccgactgcatcttcgcaacc
aacacctcgaccctgccgatctcgggcctcgccaaggcgagccgcgatccggcgcagttc
atcggcatccatttcttctcgccggtggacaagatgatgctggtcgagatcatccgcggc
aaggccaccggcgaccgcgccgtggccaaggcgctcgatttcgtgcgccagatccgcaag
acgcccatcgtggtccacgatgcgcggttcttctacgccaaccgctgcatcatcccctat
ctcaacgaggggatccgcatggtggccgagggcgtggcgcccgcgctgatcgagaatgcg
gcgaagctcgtggggatgccgctcggccccctgcaactggtggacgagacctcgatcgac
ctcggggtgaagatcgccaaggccacgaaggccgccctgggcgaggcctatccggacgcg
gcggtggatgcggtgatcttcccgctggcggacgaggggcggcttggccgaaaggcgggc
gcgggcttctatgcctacgacgccgccggcaagcgcgacgggctctggccgggtctcgcc
gaccgctggccgctggccgagacgcagcccgagcttgccgaggtgcagcaccggcttctc
ttcgcgcaggtgctcgaggcggtgcgcgcgctcgaagagggcgtgctgaccgacatccgc
gagggcgacgtgggcgccattctcggctggggcttcgcgccatggtcgggcggccccttc
agctggctcgacatgatcggcgcgccgcgtgcggtggagatctgcgagggactggccgaa
cgtcacggcccccgcttcgcgccgccgaagctgctggtcgagatggccggcaagggcgag
agcttctacgcccgcttcgcgccgcaggcccgcgcggcctga
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