Cereibacter sphaeroides KD131: RSKD131_0648
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Entry
RSKD131_0648 CDS
T00844
Name
(GenBank) Pbp2 protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk00550
Peptidoglycan biosynthesis
rsk01100
Metabolic pathways
rsk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSKD131_0648
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RSKD131_0648
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsk01011
]
RSKD131_0648
Enzymes [BR:
rsk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RSKD131_0648
Peptidoglycan biosynthesis and degradation proteins [BR:
rsk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSKD131_0648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACM00508
LinkDB
All DBs
Position
1:complement(644972..646918)
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AA seq
648 aa
AA seq
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MRRSARDSEDSARKVNRRALFLGGAMTAMFAVLGARMRYLQVDQADEFKLLAEENRINIR
LIPPTRGQIFDRNGRLIAGNEQNYRVVITREDAGDVEAVLRRLADVIPLTEPDIERVMTE
ARRHSPFVPIIVADRMAWDDLSKVAINAPSLPGVTPEVGLSRAYPLDTDFAHVVGYVGPV
SENDLAKIEDPDPLLKIPEFQIGKIGVETWMEGTLRGKAGTKRIEVNAYGRMMREIDRVE
GDAGDDIRLTIDAEIQDFVQARLGAESAAAVAIDVITGDILAICSSPSFDPNLFVRGISF
KDYAALTENDHRPLANKAVQGAYPPGSTFKMVTALAALEAGVITPETSVYCPGHYETGGR
RFHCWKRGGHGMVSLSRSLAESCDVYYYDIAQRVGIDKIAEMGRRLGLGMRHDLPMSAIT
EGIMPDKAWKRQRYEQDWRIGDTINASIGQGYVLASPLQLAVMTARVASGRAVQPRLVRS
VGDSELPVPEAPPLGVDGSLLRSVRQGMYAVINERRGTGHTNRIVDPALVMAGKSGTSQV
RNISAAERARGVISNDQLPWNRRDHALFVGFAPFDAPRVAVAVVVEHGGGGSSVAGPIVR
DVILRCLTPGPLPPLSAYPESQRARMETLLTSLPLRKIEPEVTARSRA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtgagacgatccgcccgcgattccgaggacagcgcccgcaaggtgaaccgccgcgccctc
ttcctgggcggcgccatgacggccatgttcgccgtgctcggcgcgcggatgcgctatctt
caggtggaccaggccgacgagttcaagctgctggccgaggagaaccggatcaacatccgg
ctgatcccgcccacgcgcggacagatcttcgaccgcaacggccgcctgatcgcgggcaat
gagcagaattaccgcgtcgtcatcacgcgcgaggatgcgggcgatgtcgaggccgtgctg
cgccggctggccgacgtgatcccgctgaccgagcccgacatcgagcgcgtcatgaccgag
gccaggcgtcacagccccttcgtgccgatcatcgtggccgaccggatggcctgggacgat
ctgtcgaaggtggcgatcaacgcgccgtccctgcccggtgtcacgcccgaggtgggcctg
agccgcgcctatccgctcgacaccgacttcgcccatgtggtgggctatgtgggcccggtt
agcgagaacgacctcgccaagatcgaggatccggatccgctgctgaagatccccgagttc
cagatcggcaagatcggtgtcgagacctggatggagggcacgctgcgcggcaaggccggc
accaagcggatcgaggtgaacgcctacggccgcatgatgcgcgagatcgaccgggtcgag
ggcgatgcgggcgacgacatccggctgaccatcgacgccgagatccaggatttcgtgcag
gcccgcctcggcgccgagagcgcggcggcggtggccatcgacgtaatcacgggcgacatc
ctcgcgatctgctcgtcgccctcgttcgatccgaacctcttcgtgcgcggcatctcgttc
aaggattacgcggcgctgaccgagaacgaccaccggccgctcgccaacaaggcggtgcag
ggcgcctatccgccgggatcgaccttcaagatggtcacggcgcttgcggccctcgaggcg
ggcgtgatcacgcccgaaacctcggtctactgccccggccactacgagaccggcgggcgg
cgcttccactgctggaagcgcggcgggcacggcatggtgtcgctctcgcgctcgctggcg
gaaagctgcgacgtctattactacgacatcgcccagcgggtcggcatcgacaagatcgcc
gagatgggccgcaggctcggtctcgggatgcgccacgacctgcccatgtcggccatcacc
gaaggcatcatgcccgacaaggcctggaagcggcagcgctacgagcaggactggcggatc
ggcgacacgatcaacgcctcgatcggccaaggctatgtgctggcctcgcccctgcagctc
gcggtgatgacggcgcgggtggcgagcgggcgggcggtgcagccgcgcctcgtgcggtcg
gtgggcgacagcgagctgccggtgcccgaggcgccgccgctcggcgtcgacggctcgctg
ctgcgctccgtccgtcagggcatgtatgccgtcatcaacgagcggcgcggcaccggccac
acgaaccggatcgtcgatccggcgctggtgatggcgggcaagtccggcaccagccaggtg
cgcaacatctcggctgccgaacgggcgcgcggggtcatctcgaacgaccagctgccgtgg
aaccggcgcgaccatgcgctcttcgtgggctttgcgcccttcgatgcgccgcgcgtggcg
gtggctgtcgtggtggaacatggcggcggcggctcgtcggtcgcgggcccgatcgtgcgc
gacgtgatcctgcgctgcctgacgcccgggcccctgcccccgctttcggcctatcccgag
agccagcgcgcgcggatggagacgctgctgacgagcctgccgctgcgcaagatcgaaccc
gaagtcaccgcccgctcgcgggcctaa
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