Cereibacter sphaeroides KD131: RSKD131_1862
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Entry
RSKD131_1862 CDS
T00844
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk02020
Two-component system
rsk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSKD131_1862
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RSKD131_1862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsk03021
]
RSKD131_1862
Transcription machinery [BR:
rsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RSKD131_1862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACM01722
LinkDB
All DBs
Position
1:complement(1897469..1898773)
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AA seq
434 aa
AA seq
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MDMMQFQRQTTQLAMTQRMQESLRILQMSNADLADYLTAQALENPCLEVRVPEGASVAPA
LPSRGIQAALDRDAFATVEGQPPSLLAHVEAQIDLAFFDPGDRRTALAFAEALEPSGWLG
QPVSEIAAAAEVEEEEALVILERLQAFEPAGLFARSLAECLALQLEDLGLLTWELRTMLD
HLPLLAEGRIAELARRCDCEPEHIRENLALIRSLSPKPGEAFAADRTPIQPPDVRVLRGP
EGWEVELTRAQLPRIRVSEAGDTGDRQADAWLARARSQARWLERAVERRQATLLRTAVCL
VRHQADFLDQGPRALRPLSMEEVALELDLHPSTISRATATRLIETPRGLIPLRAFFSRSV
ASDGPEAPQSQDALMALVRDIIAREDRTKPFSDDAIVKQAKLAGAVLARRTVTKYRETLG
IPSSYDRKRAAAAA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatgcagttccagcgtcagacgacccagctggccatgacccagcggatgcag
gagtcgctgcggatcctgcagatgagcaacgcggatctggccgactatctgacggcgcag
gcgctggaaaatccctgcctcgaggtgcgcgtgcccgagggggcctcggtcgcccccgcg
ctgccctcgcgcgggatccaggcggcgctggaccgcgatgccttcgccaccgtcgagggc
cagccgccgagccttctggcccatgtcgaggcgcagatcgatctggccttcttcgatccg
ggcgaccggcgcacggccttggccttcgccgaggcgctggagccctcgggctggctcggc
cagccggtctccgagatcgccgccgcagccgaggtggaggaagaggaggcgctcgtcatc
ctcgagcggttgcaggccttcgagcctgcgggcctcttcgcccggtcgctggccgaatgc
ctcgcgctgcagctcgaggatctggggcttctgacctgggagctgcgcacgatgctcgac
catctgccgcttctggccgaggggcggatcgccgagctcgcccgccgctgcgactgcgag
cccgagcatatccgcgagaatctggcgctgatccgcagcctgagccccaagccgggcgag
gccttcgcggccgaccgcacgccgatccagccgcccgacgtgcgcgtgctgcgcggcccg
gagggctgggaggtcgagctcacccgcgcgcagctgccccgcatccgggtcagcgaggca
ggggacaccggcgaccggcaggccgacgcctggctcgcccgcgcccgctcgcaggcgcgc
tggctggagcgggcggtcgagcggcggcaggccacgctcctgcgcaccgccgtctgcctc
gtgcgccatcaggccgactttctcgatcaggggccgcgcgcgctccggccgctgtcgatg
gaggaggtggcgctggaactcgacctccatccctcgaccatcagccgcgccaccgccacg
cggctgatcgagacgccgcgcgggctgatcccgctgcgcgccttcttcagccggtcggtc
gcctcggacgggccggaggcgccgcagtcgcaggatgcgctgatggcgctcgtgcgcgac
atcatcgcgcgcgaggatcgcacgaaacccttctcggacgatgcgatcgtgaagcaggcg
aagctcgcgggcgcggttctggcccggcgcaccgtcaccaaatatcgcgagacgctgggg
atcccctcctcctacgaccgcaagcgcgccgccgccgcggcctga
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