Cereibacter sphaeroides KD131: RSKD131_1912
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Entry
RSKD131_1912 CDS
T00844
Name
(GenBank) DNA polymerase III, epsilon subunit precursor
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03030
DNA replication
rsk03430
Mismatch repair
rsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSKD131_1912
03430 Mismatch repair
RSKD131_1912
03440 Homologous recombination
RSKD131_1912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsk03032
]
RSKD131_1912
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_1912
Enzymes [BR:
rsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSKD131_1912
DNA replication proteins [BR:
rsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSKD131_1912
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSKD131_1912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS
RNase_H_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
ACM01772
LinkDB
All DBs
Position
1:complement(1944462..1946549)
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AA seq
695 aa
AA seq
DB search
MLDRLNLRVRILLFFAALAGGANVAVAIGLFLAYRRLDAPELLPAFEQVGLVAGLVILGL
VTWIWYLFDANVALPIIRLASKLRARAHARIDGGIEEPTARYLGDLAPAASATALTLAET
RDALAESVARETSRLSSEKARLEALLSDVPVGLLLCSGDHQLVFYNGPATDLMNTAGAPG
LDRNLFDYLRDGPIRHAHRRLIEAGDPDAASDILCTTVVGARVLAARMRLIGGETTKPGY
VLTLRDVTSALASYARREALLAEVFDRIRRPAANLQTLFEVLPPGSCPPPDMDRALRQEA
AGLAAAVTELGARHDESRHDGWPLSLTRASDLLDGLHARMEQAGLSAEIGEAPLLLRCNG
FEVIGLVATLAARVAARRTGHDFRVTLTEDGTEAMLRLVWHGEPLPVGLLEDWLGEPLEP
GVPEVTGRTVLSTHTTEIWPEPAGAGASALCLPLRTARRTGRRPRPIPRAVVYDFELLSK
ARYEKVAEARLEDLTYVVFDTETTGLMPSQDEIVQIAAVRIVNGRRVEAEVLDTLVNPHR
SIPPSSTEVHGITDAMVAEAPDIVEVGRRFHKFAEGAVLVAHNAPFDMEFLRRAEPLIGR
RFDNPILDTVLLSAVLFGQSDVHSLDALTHRLGITIPEEARHTAIGDTVATADAFLKLLP
MLQGRGFETFGAVLSEVRRHGRLLKDLNEPHLTDA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgcctcaacctgcgcgtgcggatcctgctcttcttcgcggcgctcgcgggc
ggggcgaatgtggcggtggcgatcgggctcttcctcgcctaccggcgcctcgacgccccc
gagcttctgcccgccttcgagcaggtgggtctcgtggcgggtcttgtgatcctcgggctc
gtcacctggatctggtatctcttcgacgccaatgtggcgctgccgatcatccggctggcc
tcgaagctgcgcgcccgcgcccatgcccgcatcgacggcggcatcgaggagccgaccgcc
cgctatctgggcgatctggcgccggccgcctcggcaaccgccctcaccctcgccgagacg
cgcgacgcgctggccgagtcggtggcgcgcgagacctcgcggctgtcctcggagaaggcg
cggctcgaggcgcttctgtcggacgtgccggtggggctgctgctctgttcgggcgaccat
cagctcgtcttctacaacggccccgcgaccgacctgatgaatacggccggcgcgccgggg
ctcgaccgcaacctcttcgactatctgcgcgacgggccgatccgccatgcgcaccggcgg
ctgatcgaggcgggcgatcccgatgcggcctcggacatcctctgtaccacggtcgtgggg
gcgcgggtgctggccgcgcggatgcggctcattggtggcgagacgacgaagcccggctat
gtgctcacgctgcgcgacgtgacctcggcgctggcctcctacgcccggcgcgaggccctg
ctggccgaggtcttcgaccggatccggcggccggcggcgaacctccagacgctgttcgag
gtgctgccgcccggcagctgcccgccgcccgacatggaccgcgcgctgcggcaggaggcg
gcgggtctcgccgccgccgtgaccgaactcggcgcgcgccacgacgagagccgccacgac
ggctggccgctgtcgctcacccgcgcctcggacctgctcgatgggctgcacgcccggatg
gagcaggcgggcctctcggccgagatcggcgaggcgccgctcctcctgcgctgcaacggc
ttcgaggtgatcggcctcgtggcgacgctggccgcccgggtggcggcccggcgcaccggc
cacgatttccgcgtgaccctgaccgaggacggcaccgaggccatgctgcggctcgtctgg
cacggcgagccgctgcccgtgggccttctcgaggactggctcggcgagccgctcgagccg
ggcgtgcccgaggtgacggggcgcacggtgctttcgacccacacgaccgagatctggccc
gagcccgcgggggccggcgcctccgccctctgcctgccgctgcgcaccgcgcgccgcacg
ggccgccgcccgcggcccattccgcgcgccgtggtctatgatttcgagcttctctcgaag
gcgcgttacgagaaggtggccgaggcgcggctcgaggatctgacctatgtggtcttcgat
accgagacgacgggcctcatgccctcgcaggacgagatcgtgcagatcgccgcagtgcgg
atcgtgaacggccgccgggtcgaggccgaggtgctcgacacgctggtcaatccgcaccgg
tcgatcccgccctcctcgaccgaggtccatggcatcaccgatgcgatggtggccgaggcg
cccgacatcgtcgaggtggggcgccgcttccacaagttcgccgaaggcgcggtgctggtg
gcccacaacgcccccttcgacatggaattcctgcgccgggccgagccgctgatcggccgc
cgcttcgacaatccgatcctcgataccgtgctgctctcggcggtgctcttcgggcagagc
gatgtgcacagtctcgacgcgctgacccaccggctcggcatcaccatccccgaggaggcg
cggcacacggccatcggcgacacggtggccacggcggatgccttcctcaagctgctgccg
atgctgcaggggcgggggttcgagaccttcggcgccgtgctctcggaggtgcgccggcac
ggacggctgctcaaggacctgaacgagccgcatctgaccgacgcctga
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