Cereibacter sphaeroides KD131: RSKD131_2088
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Entry
RSKD131_2088 CDS
T00844
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk00300
Lysine biosynthesis
rsk00470
D-Amino acid metabolism
rsk01100
Metabolic pathways
rsk01110
Biosynthesis of secondary metabolites
rsk01120
Microbial metabolism in diverse environments
rsk01230
Biosynthesis of amino acids
Module
rsk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSKD131_2088
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSKD131_2088
Enzymes [BR:
rsk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RSKD131_2088
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACM01948
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All DBs
Position
1:2124458..2125765
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AA seq
435 aa
AA seq
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MHPLRAPDLQADQKMDHFLYRNGSLHAEEVPLSDIAATVGTPFYCYSAATLERHYRLFTE
ALTPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSAGEYLRARAAGVPGDRIVFSGVGK
TREEMRIALEGGIRQFNVESEPEMRALSEVASSMGLRAPIAVRVNPDVDARTHEKIATGK
KENKFGIPIERASEVYAEAAALPGLEVMGVDVHIGSQLTELEPFEQAYLKVAELTGRLRA
EGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRTVGHLGCEIEIEPGRLISGNSGV
LVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDIVPLAEAAPGTESQPYDVVGPVC
ETGDTFAKARALPPMAEGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVRGDHFAVIRARP
TFDEMLGRDSIPEWL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgcatccgctccgcgcccccgatcttcaggctgaccagaaaatggaccatttcctctac
cgcaacgggtcgctccacgccgaggaggtgccgctctcggacatcgccgcgaccgtcggc
acgcccttctactgctactcggcggccacgctcgaacggcactaccggctcttcaccgag
gcgctgacgcccctgccgcatctggtctgcttcgcgatcaagtcgctgtcgaacctcgcg
gtgctgaagcttctgggcgatctcggcgcgggcatggatgtggtctcggcgggcgaatat
ctgcgcgcgcgcgccgcgggcgtgccgggcgatcggatcgtcttctcgggcgtgggcaag
acccgcgaggagatgcggatcgcgctcgagggcgggatccggcagttcaacgtggaatcc
gagcccgagatgcgggcgctgtccgaggtggcctcctcgatggggctgcgcgcacccatc
gccgtgcgggtgaaccccgacgtcgatgcccgcacccacgagaagatcgccaccggcaag
aaggagaacaagttcggcatcccgatcgagcgcgcctccgaggtctatgccgaggccgcg
gccctgcccgggctcgaggtcatgggggtcgacgtccatatcggctcgcagctgaccgag
ctcgagcccttcgagcaggcctatctgaaggtggcggagctcaccggccggctgcgcgcc
gagggccacgagatccgcaggctcgacctcggcggcggcttgggcatcccctacacccgc
tcgaacgaggccccgccgctgcccaccgactacggcgcgctcatcaagcgcaccgtgggc
catctcggctgcgagatcgagatcgagcccggacggctgatctcgggcaattcgggcgtg
ctggtgagccgggtcatctatgtcaagaacggcgagggacgcgacttcctgatcctcgac
gcggcgatgaacgatctcgtgcggccctcgatgtatggcgcgcaccacgacatcgtgccg
ctggcggaggccgcgccgggcaccgaaagccagccctacgacgtggtgggcccggtctgc
gagacgggcgacaccttcgccaaggcgcgcgcgctgccgccgatggccgagggcgatctg
gtggccttccgctcggccggggcctatggcgcggtgatggcctcggaatacaattcccgc
ccgctggtgcctgaggttctggtgcgcggggatcacttcgccgtcatacgggcgagaccg
acgtttgacgaaatgctcggccgcgatagcatccccgaatggctgtga
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