KEGG   Cereibacter sphaeroides KD131: RSKD131_2217
Entry
RSKD131_2217      CDS       T00844                                 
Name
(GenBank) Exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rsk  Cereibacter sphaeroides KD131
Pathway
rsk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RSKD131_2217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsk03400]
    RSKD131_2217
Enzymes [BR:rsk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RSKD131_2217
DNA repair and recombination proteins [BR:rsk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RSKD131_2217
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ACM02077
LinkDB
Position
1:2251814..2252602
AA seq 262 aa
MTFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYHWCVAR
GQKSYNGVAILSKLPLVDAGDHDFADLGHARHVSAALENGVTIHNCYVPAGGDIPDREQN
VKFGQKLDYLTRMRDWCRADTPKKAILVGDLNIAPREDDVWNHKSLLKIVSHTPIEVDHL
NALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHGSRI
LKAARGWLQPSDHAPVFATFDL
NT seq 789 nt   +upstreamnt  +downstreamnt
atgaccttcaccctcgccacctggaacatcaactcggtccgcctgcgcgaggcgctggtc
tcgcggctgctgacggaggagatgcccgacatcctctgcctgcaggaatgcaagagcccg
gtcgagaagatgccgctcgaggcgttccgggcgctcggctaccactggtgcgtggcacgc
ggacagaagagctacaacggcgtggcgatcctgtcgaagctgccgctagtggatgcgggc
gaccatgactttgccgatctcggccatgcgcggcatgtgtcggcggcgctcgagaacggc
gtgacgatccacaactgctatgtccccgccggcggcgacattcccgaccgcgagcagaat
gtgaagttcggccagaagctcgattacctgacgcggatgcgagactggtgccgggccgac
acgccgaagaaggcgatcctcgtgggcgatctcaacatcgccccgcgcgaggacgatgtc
tggaaccacaagtccctgctgaagatcgtgagccacacgccgatcgaggtggaccatctg
aacgcgctgatggaggcgggcgcctggatcgacgtgacccgcaaggacctgccagagggg
cggctctattcctggtggtcctaccgctcgcccgactgggaggcggccgacaaggggcgc
cggctcgaccatatctgggccacgcccgacatcgtcaatgccgcgcacggcagccgcatc
ctcaaggctgcgcggggatggctgcagccgtcggaccatgcgccggtcttcgccaccttc
gatctctga

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