KEGG   Cereibacter sphaeroides KD131: RSKD131_2505
Entry
RSKD131_2505      CDS       T00844                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
rsk  Cereibacter sphaeroides KD131
Brite
KEGG Orthology (KO) [BR:rsk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsk03016]
    RSKD131_2505
Enzymes [BR:rsk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     RSKD131_2505
Transfer RNA biogenesis [BR:rsk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RSKD131_2505
 Prokaryotic type
    RSKD131_2505
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: ACM02365
LinkDB
Position
1:2538501..2539406
AA seq 301 aa
MGRTRKGRAISGWLVVDKPAGMTSTAVVNKVRWALEAQKAGHAGTLDPDATGVLAVALGE
ATKTVPYITDALKCYRFMVQLGLSTRTDDASGEVIATSEARPTDVEIAAALTAFRGEIQQ
VPPQFSAVKVEGERAYDLARDGERLDLAARPLWVESLEILSRPDADHVELEMVCGKGGYV
RSIARDLGEALGCHGHVAWLRRTWSGPFEAEDGISVATIDELARSEALLSHVLPLAKGLA
DLPELPATPEGAARLRCGNPGMVIASDVEFGEEAWASFQGQPVAVGIYKSGELHPSRVFN
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggacggacgcgcaagggccgggcgatctcgggctggctggtggtggacaagcctgcg
ggcatgacctcgaccgcggtcgtgaacaaggtgcgctgggcgctcgaggcgcagaaggcg
ggccatgcgggcacgctcgaccccgatgcgacgggcgttctggccgtagccctgggcgag
gccacgaaaaccgtgccctacatcaccgatgcgctgaaatgctaccgcttcatggtgcag
ctgggcctgtccacccgcaccgacgacgcgagcggcgaggtgatcgccacctccgaggcg
cgcccgacggatgtggagatcgcggcggcgttgacggccttccggggcgagatccagcag
gtgccgccgcagttctcggcggtgaaggtcgagggcgagcgcgcctatgatctcgcccgg
gacggcgagcggctggatctggcggcccgtccgctctgggtcgagagcctcgagatcctt
tcgcggcccgacgcggaccatgtcgagctggagatggtctgcggcaagggcggctatgtc
cgctccatcgcgcgcgatctcggcgaggcgctcggctgccacggccatgtcgcctggctg
cgccgcacctggtcggggccgttcgaggccgaggacgggatctcggtcgcgaccatcgac
gagctcgcgcggagcgaggcgctgctttcccatgtgctgccgctggcgaagggcctcgcg
gatctgcccgaactgccggccacgcccgagggggccgcgcggctccggtgcggcaatccc
ggcatggtcatcgcctcggatgtcgagttcggcgaggaagcctgggcgagtttccagggc
cagcccgtcgcggtgggcatctacaagtcgggcgagctgcatccgagccgggtgttcaac
ctctga

DBGET integrated database retrieval system