KEGG   Cereibacter sphaeroides KD131: RSKD131_2629
Entry
RSKD131_2629      CDS       T00844                                 
Name
(GenBank) Transcription termination factor rho
  KO
K03628  transcription termination factor Rho
Organism
rsk  Cereibacter sphaeroides KD131
Pathway
rsk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RSKD131_2629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsk03021]
    RSKD131_2629
   03019 Messenger RNA biogenesis [BR:rsk03019]
    RSKD131_2629
Transcription machinery [BR:rsk03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RSKD131_2629
Messenger RNA biogenesis [BR:rsk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RSKD131_2629
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 S1CSD-TOTE-2 NACHT AAA_22 OB_RNB AAA Lactamase_B
Other DBs
NCBI-ProteinID: ACM02489
LinkDB
Position
1:complement(2676392..2677660)
AA seq 422 aa
MNERLNLADLKAKTPADLLAMAEEWEIENAPSMRKGEMMFSILKEHAEEGYEVGGDGVLE
VLQDGFGFLRSPEANYLPGPDDIYVSPEILRQFSLRTGDTIEGVIVAPRENERYFSLTRV
TKINFDDPERARHKVHFDNLTPLYPDERLKMEVDDPTMKDRSARIIDLVAPIGKGQRGLI
VAPPRTGKTVLLQNIAHSIATNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPA
TRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQR
PKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVFP
AMDILKSGTRKEDLLVDKSDLQKTYVLRRILNPMGTTDAIEFLISKLRQTKSNAEFFDSM
NT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacgaacgtctcaacctcgccgacctgaaggccaaaactccggccgatctcctggcc
atggccgaggagtgggagatcgagaacgcgccttccatgcggaagggcgagatgatgttc
tcgatcctcaaggaacatgcggaggaaggctacgaagtcggcggagacggcgtgctcgag
gtgctgcaggacggtttcggcttcctgcgctcgcccgaggccaactatctgccgggcccg
gacgacatctacgtctcgcccgagatcctgcgtcagttctctctgcgcaccggcgacacg
atcgagggcgtgatcgtcgcgccccgcgagaatgaacgctatttcagcctgacgcgggtg
acgaagatcaacttcgacgatcccgaacgggcgcgccacaaggtgcacttcgacaacctc
acgccgctctatcccgacgaacggctgaagatggaagtcgacgatcccacgatgaaggac
cgctccgcgcgcatcatcgatctggtggcgccgatcgggaaggggcagcgggggctgatc
gtggcgccgccgcggaccggcaagacggtgctcctgcagaatatcgcccattccatcgcg
accaatcaccccgagtgctacctgatcgtgctgctcatcgacgagcggcccgaggaggtc
acggacatgcagcggtcggtgaagggggaggttgtctcctcgaccttcgacgagcccgcc
acgcggcacgtcgccgtggccgagatggtcatcgagaaggccaagcgcctcgtcgagcac
aagcgcgacgtggtgatcctgctcgactcgatcacccgcctcgggcgcgccttcaacacc
gtggtgccctcgtccggcaaggtgctgaccggcggcgtcgatgccaacgcgcttcagcgt
ccgaaaaggtttttcggcgcagcgcggaacatcgaggaaggcgggtcgctgacgatcatc
gcgaccgccctgatcgataccggcagccggatggacgaagtgatcttcgaagaattcaag
ggcaccggcaactccgagatcgtccttgaccggaaggtcgccgacaagcgcgtgttcccc
gccatggacatcctcaaatccggcacccggaaagaggatcttctggtcgacaagtccgac
ctgcagaagacctatgtcctgcgccgcatcctgaacccgatgggcaccaccgatgcgatc
gagttcctgatctccaagctgcggcagaccaagagcaacgcggaattcttcgattccatg
aacacctga

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