Cereibacter sphaeroides KD131: RSKD131_3253
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Entry
RSKD131_3253 CDS
T00844
Name
(GenBank) Deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rsk
Cereibacter sphaeroides KD131
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_3253
Enzymes [BR:
rsk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RSKD131_3253
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RSKD131_3253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ACM03113
LinkDB
All DBs
Position
2:complement(157077..158603)
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AA seq
508 aa
AA seq
DB search
MTRLILVLGDQLSDDLPALRAADPSADLVVMAEVMEEGTYVPHHPQKIALILAAMRKFAR
RLQERGFRVAYSRLDDAETGPSIGAELLRRAAETGARQVIATRPGDWRLIEALESLPLPV
RFLPDDRFLCPADEFARWAEGRKQLRMEWFYREMRRRTGLLMEGGEPAGGKWNFDAENRK
PATPDLLRPRPLRFEPDAEVRAVLDLVEARFPRHFGRLRPFHWPTDRAEALLALDHFIRE
SLPRFGDEQDAMLADDPFLSHALLSSSMNLGLLGPMEVCRRAETEWREGRAPLNAVEGFI
RQILGWREYVRGIWALSGPNYMRSNGLGHSAALPPLYWGKPTRMACLSAAVAQTRDLAYA
HHIQRLMVTGNFALLAGVDPAEVHEWYLSVYIDALEWVEAPNTIGMSQFADHGLLGSKPY
VSSGAYIDRMSDYCRGCAYAVKDRTGPRACPFNLLYWHFLNRHRARFKRNPRMVQMYRTW
DRMEETHRARVLTEAEAFLGRLHAGEPV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgacacggctcatcctcgtgctgggcgaccagctcagcgacgatcttccggcgctccgg
gcggcggatccgtccgccgatctcgtggtcatggccgaggtgatggaggagggcacctat
gtcccgcaccatccgcagaagatcgccctgatcctggccgccatgcgcaagttcgcccgc
cgcctgcaggagcgcggcttccgcgtggcctattcccggctggacgatgccgaaaccggg
ccctcgatcggcgccgagctcctgcggcgggccgcagagaccggcgcccgccaagtgatc
gcgacccggcccggcgactggcggctgatcgaagcgctcgagtccctgcccctgcccgtc
cgcttcctgcccgacgaccgtttcctctgcccggccgacgagttcgcccgctgggccgag
ggccgcaagcagctgcgcatggagtggttctatcgcgagatgcgccgcaggaccggcctc
ctgatggagggcggcgagcccgcgggcgggaagtggaacttcgacgccgagaaccgcaag
cccgcaacgcccgacctgctgcgtccgcgcccgctgcgcttcgagcccgacgccgaggtg
cgcgcggtgctcgatctcgtcgaggcgcgctttccgcgccatttcggccggctgcgcccg
ttccactggcccacggaccgggccgaggcgctgctggcgctcgatcacttcatccgcgaa
agcctgccgcgcttcggcgacgagcaggatgcgatgctggccgacgatccgttcctgagc
catgcgctgctgtcctcgtcgatgaacctcgggcttctcgggccgatggaggtttgccgc
cgggccgagaccgagtggcgcgagggccgcgcgccgctgaacgcggtcgagggcttcatc
cggcagatcctcggctggcgggaatatgtgcgggggatctgggcgctctcggggccgaat
tacatgcgctcgaacgggctcggccacagcgccgccctgccgccgctctactggggcaag
cccacgcggatggcgtgcctctcggccgcggtcgcccagacccgcgatctcgcctatgcc
caccacatccagcggctgatggtgacgggcaatttcgcgctgctggcgggcgtcgatccc
gccgaggtgcacgaatggtatctctcggtctatatcgatgcgctggaatgggtcgaggcg
ccgaacacgatcgggatgagccagttcgccgatcacgggctcctcggctcgaaaccctat
gtctcgtccggcgcctacatcgaccggatgtcggattactgccgcggctgcgcctatgcg
gtgaaggaccggacggggccccgcgcgtgccccttcaacctgctctactggcacttcctg
aaccggcaccgcgcgcggttcaagcgcaacccccgcatggtccagatgtatcgcacctgg
gaccggatggaagagactcaccgcgcgcgggttctgaccgaggcggaggccttcctcggc
cggctccacgcaggcgagccggtctga
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