Cereibacter sphaeroides KD131: RSKD131_3707
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Entry
RSKD131_3707 CDS
T00844
Name
(GenBank) Hemolysin-type calcium-binding region, RTX
Organism
rsk
Cereibacter sphaeroides KD131
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin_4
Big_9
K319L-like_PKD
Motif
Other DBs
NCBI-ProteinID:
ACM03567
LinkDB
All DBs
Position
2:complement(640533..648413)
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AA seq
2626 aa
AA seq
DB search
MNLTSALTFSEGGVPQLVDPNITITGGGAFTEGYIEFSVSSPTAGDNFSLTSAANPLANG
AISFENGDVYLGTGSARERIGSVDATFDGQDGQPLRILFSSPLPNAGFEEGEANWTIRDE
QYGDNGSELNLDGLQITLANDSAYSGGTGTTNVQASAGMTWDGSVQDGAGVDGSRALYLG
SGGNIVAGDQNPPGSYQVNGYGSIHGPYATSSVITVAQGDSISLDFQAVGTSDDYEVFGF
LRRVDANGNFLSNSVSSPDNILLFAQRGDDTGGWTTISKDGLPAGNYRFEFVGGTYDGTG
GLAVGSNLYVDNIRLISATSVNDSIAQAIARQVAYQNDADDAPVTRQITVTAVDGNGISG
SSSNGLTFEGENDAPSLANTTLTSIAEDSSPAGQTIAAAFGGSFSDPDNAYSPTDSMAGV
VITGNAATGAQGDWQYSTDGGTTWISVGSVTSQSGLVLSSATLIRFEPALNWNGTPGALT
LHALDSTYGGSFTSGTTTVSLDTTGATGTGPLSQNSATGSIIVTPVNDAPVFTAAPVALT
VADTEAVDTPAALTGSISASDLHGGAPGEGGTLSYGVQGGVSANGFSVLTLPYGTLSVNQ
STGAYSFLPNPTALNSLPEGAEANFSFTLTVSDGQGGTQTAPLDITFTGANDVPVVSAQT
GTAVEASGLNNNVAGSAATGSLLSGPNAATDIDGDEISVVGVRTGGQSDTGTEGVWTNGT
ITLQGTYGTLTLNEDGSWSYTADDDNPTVDGLTGPTDTLEETFTYTVTDSNGATASQELT
VTISGRNDALNVSSNIGTDISTGEDADTQIDLTGLVFEDPDLGSEIYEFAVDAGQGTLWT
QGGQGLTVTGNGTGQLVLTGSATAISEWIAANDLTYRSPVEGSGADTINLSYSEAGAEVR
TPLETIDVAVDMVNDPAVVDVNGSVTTQGSAGVAEVAQVTFLSTGTAQVLNFDGVQMQIA
AGSTAAEIAEAFAAQEFPNWTVSHDGQGRVTLTATATGARPDLTAADFTNGSGAFSPLVE
TTGGTDGSINFTARGPAIAILPTLELSDVDSAMMSGAKVSMTEGLFDNGFGTIYERLSLS
AEAREFAQQNGVGISIVTTAAAGSVITFTGMASAEVYETILRGVIYSNTNPNAVAGTRPV
KIEVTDSDGLASSLSSVNLTEGNTDIAVGQRIFINGVDSGQVVSMVRDATSFVASGPLAD
LEPGAVLSFHDGSGQQTTAVSAGDGTATMDVNVIWAPVIDMNGAGAGDIHRTTYIEQHAP
IAIATADARIVDQEGLIRSLDVVLTNPLDNVEGSAPVEYLGISKAVLDVLAARGITIGAH
DGQFDANGNLTGATSITFAAANGASATSFQIALRGVTYANMDDAPDTGTRIVTAQGTDMD
GNEGLISHTEINPIAVGDAPVAIDSGVTGSEDTGHVFAAGDFGFADPLDGGANQLASITI
NSLPATGTLLLGGVAVAVGTVVTLAQLQAGALTYQPVANVNGEGVASFDFLVTDNGSLAN
GGQTTSTAPATMVIDLTPVNDAPVLPEGTSVTGTTITEDQQLNAGELVADLVGAMTDVDT
GVHSATNGTQQGIAVYGAGSEGFGGGTWQYRLAGGTDWIDVTLDPGEVLLLGADDRIRFS
PDGENATEAQLSYYAWDGATGTAGNVVAGIAGPGNASNRGGTSAFSSNGASATIEVTAVN
DAPSISMGEGNTFYARGDAVALFSEETLQLADPDEGAAVSQIVITLDGETTVDNAFGTTY
ETIFSASGSTFVAQSGTELTISGTGLAGDPLTISGAGSMQDYREALLSLRYENTNPNAFA
GDRAISVTVTDETGADSAPTDFILPVEWATVADLNGPSGEGRDHSITYLEGSGSQAIATA
DAEMIDQEGNTVEVVITLEDAVNGSAEMLFVDPAVLPALAALNIVVTGNGTHEIRLTSEE
GVDPTNFQLALRAVRYVNSSTAPTAAERHVTVSSTDADGNPGVPATTVIGMELVNDAPVA
DLSISYEASETRNPLSGDQLLLDGTLDDADGLGPNPPVIQWLRDGVVIASGNGMPVYTLK
PADAGHVISARITYTDGEGNLEVINVAGPAMVGLNLEGTDGADLLTGSRGADVISGRMFN
DTLIGGAGNDTLFGGGDDDRLYGNEGNDSLYGEAGNDWLHGGQGDDLVVGGDGNDTLAGG
LGNDTLQGGAGNDTASYETATEGVTVSLVLQGEGQLVNAQEGYDLLTSIENLTGSRYNDT
LIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGEGNDIADYSAATGGVTVNLARDGLAQVIG
ADQGIDVLSSIEGVIGSSSNDILSGSAVANLIFGGDGADLITGAAGNDTILGGAGSDSLY
GNLGDDLLYGDLGDDWIHGGQGNDTVVGGAGDDTLAGGLGDDVVDGGEGIDTVEFQTATA
GVTVDLSLQGQAQRISAEEGMDTLFSIENILGSRYDDRLLGDAGSNVIDGSAGNDTVMGQ
AGEDLIFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGNDTLNGGVGDDVL
VGGQGFDLLTGGTGADTFVFGSLDSADADRITDFEQGVDRILIADQLMWALENAELNLAD
QIVWNAETGMLSIDLDAGETTRLVNLAQIDHDGTLNITIDDFQFLI
NT seq
7881 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctgacctctgccctgaccttctccgagggcggcgtgccgcagctcgtcgacccg
aacatcacgatcacgggcggcggagcctttaccgaaggctacatcgaattctcggtcagc
tcgcccacggccggcgacaacttcagcctgaccagcgccgccaatccgctggccaacggc
gcgatctcgttcgagaacggcgacgtctatctcgggaccggctcggcccgcgagcggatc
ggctcggtcgatgcgaccttcgacggccaggacggccagccgctgcgcatcctgttctcg
agcccgctgccgaacgccggcttcgaggaaggcgaggcgaactggaccatccgcgacgag
caatatggcgacaacggcagcgagctgaacctcgacggcctgcagatcacgctggccaat
gactcggcctacagcggcggcaccggcacgaccaacgtccaggcctccgccggcatgacc
tgggacgggtcggtgcaggatggtgcgggcgttgacggatcgcgcgccctctatctcggc
agcggcggaaacatcgttgcgggagaccagaacccgcccggcagctatcaggtcaacggc
tacggctcgatccacggcccctatgccaccagctcggtgatcaccgtcgcgcagggcgac
tcgatctcgctcgactttcaggccgtgggcacgagcgacgactacgaagtgttcggcttc
ctgcgtcgcgtcgacgccaacggcaacttcctgagcaacagcgtcagcagccccgacaac
atcctgctcttcgcccagcggggcgatgacaccggcgggtggacgaccatcagcaaggac
ggcctgcccgcaggcaactaccggttcgaattcgtcggcggcacctatgacggcacgggc
ggcctcgcggtgggctcgaacctctatgtcgacaacatccgcctgatctcggccacctcg
gtgaacgacagcatcgcccaggccatcgcccggcaggtcgcctaccagaacgacgccgat
gatgcgccggtcacccgccagatcacggtcacggccgtggatggcaacggcatcagcggc
tcctcctcgaacggcctgaccttcgaaggcgagaacgacgcgccgagccttgccaacacc
acgctcacctcgatcgccgaggacagcagcccggccggccagaccatcgccgcggccttc
ggcggctccttctcggatcccgacaacgcctattcgcccaccgactcgatggcgggcgtc
gtcatcaccggcaatgcggcgaccggcgcccagggcgactggcaatattcgaccgacggc
ggcaccacctggatctcggtcggcagcgtgacctcgcagagcgggctcgtgctttcctcg
gccacgctgatccgcttcgagcccgcgctgaactggaacggcacgcccggcgcgctgacg
ctccatgcgctggacagcacctatggcggcagcttcacgagcggcacgacgacggtcagc
ctcgatacgaccggggccaccggcaccggcccgctcagccagaacagcgccaccggctcg
atcatcgtcacgccggtcaacgacgcccccgtcttcaccgcggccccggtcgcgctgacg
gtggccgataccgaggccgtggacacgccggccgcgctcaccggctcgatctcggcctcc
gacctgcatggcggtgcgccgggcgaaggcggcacgctcagctatggcgtccaaggcggc
gtgtcggccaacggcttctcggttctgacactgccctacggcacgctgtcggtgaaccag
tcgaccggagcctacagcttcctgccgaaccccacggcgctgaacagcctgcccgagggt
gcggaggcgaacttctccttcacgctcaccgtctcggacgggcagggcggcacgcagacc
gcgccgctcgacatcaccttcaccggcgccaacgacgtgccggtcgtcagcgcccagacc
ggcacggcggtcgaagcctcgggtctcaacaacaacgtcgccggcagcgcggccacgggc
tcgctgctgagcggcccgaatgcggcgaccgatatcgacggcgacgagatctcggtggtg
ggtgtgcgcaccggaggccagtccgacaccggcaccgaaggtgtctggaccaacggcacg
atcacgcttcagggcacctacggcaccctgacgctgaacgaggacggcagctggtcctac
acggcggacgatgacaatccgacggtcgacggcctgaccgggccgaccgacacgctggag
gagaccttcacctacaccgtgacggattcgaacggcgccaccgcgtcgcaggagctgacc
gtcaccatctcgggccgcaacgatgcgctgaacgtgtcgagcaacatcggcaccgacatc
tcgaccggtgaagatgccgacacgcagatcgacctcaccggcctcgtgttcgaagacccc
gatctgggctcggaaatctacgaattcgccgtggatgcgggccaaggcacgctctggacg
caaggcgggcaggggctgaccgtcaccggcaacggaacgggccagctggtgctgacgggc
tcggccaccgcgatttccgaatggatcgcggccaacgacctgacctatcgctcgcccgtg
gaaggcagcggcgccgacacgatcaacctctcctacagcgaggcgggcgccgaagtccgc
acgccgctcgagacgatcgacgtggcagtggacatggtcaacgacccggccgtggttgac
gtgaacggctctgtcacgacccagggcagcgccggcgtggccgaagtggctcaggtcacc
ttcctgtcgaccggcaccgctcaggtactgaatttcgacggggtgcagatgcagatcgcg
gccggcagcaccgccgccgagatcgccgaagccttcgcggcgcaggaattcccgaactgg
accgtcagccatgacggccagggccgggtaacgctgaccgcgaccgccaccggcgcgcgt
ccggacctgacggcggccgacttcaccaacggctcgggcgccttctcgccgctggtcgag
accaccggtggcaccgacggcagcatcaatttcaccgcgcgcgggcctgccatcgccatc
ctgccgacgctggaactgagcgacgtcgacagcgcgatgatgtcgggcgccaaggtcagc
atgaccgaaggcctgttcgacaacgggttcggcacgatctacgaacggctctcgctgtcg
gcggaggcgcgggaattcgcgcagcagaacggcgtgggcatcagcatcgtgacgacggcc
gctgccggctcggtcatcaccttcaccggcatggcctcggcggaggtctacgagaccatc
ctgcgcggcgtgatctacagcaacaccaacccgaatgcggtggcgggcacccgccccgtg
aagatcgaagtgaccgactccgacgggctcgcctcgagcctctccagcgtcaacctgacc
gagggcaacaccgacatcgccgtcggccagcgcatcttcatcaacggcgtggacagcggc
caggtcgtctcgatggtgcgcgacgccaccagcttcgtggccagcggcccgctggccgat
ctggagcccggcgcggtgctgagcttccatgacggcagcggtcagcagaccacggcggtt
tcggcgggcgacggcacggccacgatggacgtgaacgtgatctgggctcccgtgatcgac
atgaacggcgccggcgcgggcgatatccaccggacgacctacatcgagcagcatgccccg
atcgccatcgcgaccgccgatgcccgcatcgtcgatcaggaaggtctgatccgctcgctc
gacgtcgtgctgaccaacccgctcgacaatgtcgaaggttcggctccggtcgaatatctc
ggcatctcgaaggcggtgctggacgtgctggcggcccgcggcatcaccatcggtgcccat
gacggccagttcgacgccaacggcaacctgaccggcgccacctcgatcaccttcgcggcg
gccaacggcgccagcgccaccagcttccagattgcgctgcggggcgtgacctatgccaac
atggacgatgccccggacaccgggacgcggatcgtgacggcgcagggcaccgacatggac
ggcaacgagggcctgatctcgcacaccgagatcaacccgatcgcggtgggcgacgcgccg
gtggcaatcgacagcggcgtgaccggctccgaggatacgggccatgtctttgccgccgga
gacttcggctttgccgatccgctggatggcggcgcgaaccagctcgcctcgatcaccatc
aacagcctgcccgccacgggcacgctgctgttgggcggggtcgcggtcgccgtgggcacc
gtggtcaccctcgcgcagcttcaggccggcgcgctgacctatcagccggtcgccaacgtg
aacggtgagggggtcgcctcgttcgacttcctcgtgaccgacaacggcagccttgccaac
ggcggccagaccacctcgaccgctccggcaaccatggtgatcgacctgacgccggtgaac
gatgctccggtcctgccggaaggcacctccgtcaccggcaccacgatcaccgaagaccag
cagctgaatgccggtgaactggtggccgatctggtcggcgccatgacggatgtcgatacg
ggcgtgcacagcgccacgaacggcacccagcagggcatcgcggtctatggcgcgggctcc
gaagggttcggcggcggcacctggcagtatcgtctcgccggcggcaccgactggatcgat
gtcaccctcgatccgggcgaggtcctgctgctcggtgcggacgaccgcatccgcttctcg
ccggatggcgagaacgcgaccgaggcgcagctgtcctactacgcctgggacggggcgacc
ggcaccgcgggcaacgtggtcgcaggcatcgcggggccgggcaatgcctcgaaccgtggc
ggcacgtcggccttctccagcaacggcgcctcggccaccatcgaggtgacagctgtcaac
gacgcaccgtcgatcagcatgggcgagggcaataccttctatgcccgcggcgatgcggtg
gcgctgttctcggaagagacgctgcaactcgccgacccggacgagggcgcggcggtgagc
cagatcgtcatcacgctcgatggcgagaccacggtcgacaacgccttcggcaccacctac
gagacgatcttctcggccagcggctcgaccttcgtggcccagtcgggcaccgagctgacc
atctcgggcaccggtctggcgggcgatccgctcaccatctcgggcgccgggtcgatgcag
gattaccgtgaggcgctcctcagcctgcgctacgagaacaccaacccgaacgccttcgcg
ggcgaccgggcgatctcggtcacggtgacggatgagacgggcgcggactccgcgccgacg
gacttcatcctgccggtggaatgggcaacggtggccgatctcaacggtccgtcgggcgaa
ggccgcgaccactcgatcacctatctcgagggcagcggcagccaggcgatcgccaccgcc
gacgccgagatgatcgaccaggagggcaacaccgtcgaggtcgtcatcacgctcgaggat
gcggtgaacggctcggccgagatgctgttcgtcgatccggcggtcctgccggctctggcg
gcgctgaacatcgtggtcaccggcaacggcacccacgagatccggctgacgagcgaggag
ggcgtggatcccacgaacttccagctggcgctgcgggccgtgcgttacgtcaacagctcg
accgcacccactgcggcggagcgccatgtcacggtctcctcgaccgatgccgacggcaac
ccgggcgttccggccaccacggtgatcgggatggagctggtgaacgacgcaccggttgcg
gatctctcgatctcctacgaggcgtcagagacccgcaacccgctgtcgggcgatcagctg
ctgctcgacggcacgctggacgacgccgacgggctcgggccgaacccgccggtcatccag
tggctgcgggacggcgtggtgatcgcttctggcaacggcatgccggtctacacgctgaaa
ccggcggatgcaggccatgtcatcagcgcccgcatcacctacaccgacggtgagggcaac
ctggaggtcatcaacgtcgccggtcctgccatggtcgggctgaacctcgaaggcaccgac
ggcgccgatctgctcaccggctcgcgcggggcggacgtgatctccggccggatgttcaac
gacacgctgattgggggcgcaggcaacgacacgctcttcggcggcggtgacgacgaccgg
ctttacggcaacgagggcaacgacagcctctatggcgaggcgggcaacgactggctgcat
ggcggtcagggcgacgacctggttgtgggcggcgacggcaacgacacgctcgcgggcggt
ctgggcaacgacaccctgcagggtggcgcgggcaacgacacggccagctacgaaacggcc
accgagggcgtcaccgtcagcctcgtgctgcagggcgaaggccaactggtgaacgcgcag
gaaggctacgacctgctgacctcgatcgagaacctgacgggcagcaggtacaacgacacg
ctgatcggggacgagggggacaacgtgctctcgggtctcgcgggcaacgatgtgctggtg
ggcggcgcgggcaatgacacgctgctcggcggtgagggcaacgacatcgccgactactcc
gcggcaacgggcggggtgacggtcaatctggcgcgtgacggactggcgcaggtcatcggg
gccgatcagggcatcgatgtcctgagctcgatcgagggtgtcatcggcagctcctccaac
gacatcctgtcggggagcgcggtcgccaacctcatcttcggcggggacggtgctgacctg
atcaccggtgccgcgggcaacgacaccatcctgggcggtgccgggtcggacagcctctat
ggcaacctcggcgacgacctcctctatggtgacctgggcgacgactggatccacggcggt
cagggcaacgacaccgtggtcggcggtgccggcgacgacacgctggccggcggcctcggc
gacgatgtggtggatggcggtgaggggatcgacacggtcgaattccagaccgcaaccgcc
ggtgtcaccgtggatctctcgctgcagggtcaggcgcagcgcatcagtgccgaggaaggc
atggatacgctgttctcgatcgagaacatcctcggcagccggtatgacgaccgcctgctg
ggcgatgcgggctcgaacgtgatcgacggcagtgccggcaacgacactgtcatgggtcag
gcgggcgaggacctcatcttcggcggggacggtaacgacagcctctatggcaaccaggac
aacgacactctggtcggcggcaacggcaacgactggttgcacggcggtcagggcaacgat
ctcctggtgggcgatgccggcaacgataccctcaacggcggtgtgggcgacgatgtgctg
gtcgggggtcagggcttcgaccttctgacgggcggcaccggggcggacactttcgtcttc
ggcagcctcgacagcgcggatgcggatcggatcaccgatttcgagcagggcgtcgaccgc
atcttgatcgccgaccagctgatgtgggcgctggagaatgccgagctgaacctcgcggat
cagatcgtctggaatgccgagaccgggatgctctcgatcgatctcgacgccggcgagacg
acccgtctggttaatcttgctcagatcgatcatgatgggacgctgaacatcacgatcgac
gacttccagttcctgatctga
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integrated database retrieval system
