Cereibacter sphaeroides KD131: RSKD131_3721
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Entry
RSKD131_3721 CDS
T00844
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03030
DNA replication
rsk03430
Mismatch repair
rsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSKD131_3721
03430 Mismatch repair
RSKD131_3721
03440 Homologous recombination
RSKD131_3721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsk03032
]
RSKD131_3721
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_3721
Enzymes [BR:
rsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSKD131_3721
DNA replication proteins [BR:
rsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSKD131_3721
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSKD131_3721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
ACM03581
LinkDB
All DBs
Position
2:complement(658016..661507)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSNAPRFIHLRVHTEYSLLEGAVPVKKLIGLCTAAAMPAVAVTDTNAMFAALEFSVLASG
AGIQPIVGCQVSVAYETVALGERPKPPAPVVLLAQTETGYGNLMKLSSCLYLGKEGALPQ
VTLSELERHGEGLICLTGGPDGPVGRHLREGQRAKAEALLGRLAAIYPGRLYVELQRHPG
EGGRLTEAERATEPGHVELAYAMGLPLVATNDVYFPKPEMYEAHDALICIAEGAYVDQVA
PRRRLTPQHYFKSEAEMVALFADLPEAVENSVEIARRCAFKAAKRPPILPRFADDEVEEL
RRQAKEGLAARLAVIPHAAPVEDYEARLAFELGIIEQMGFPGYFLIVADFIKWGKANGIP
VGPGRGSGAGSLVAYALTITDLDPLRYQLLFERFLNPERVSMPDFDIDFCMDRREEVIRY
VQEKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIQKAL
ADEPRLREAAKTEEVVKRLLDYGMQVEGLLRNASTHAAGVVIGDRPLDELVPLYQDPRSD
MPATQFNMKWVEAAGLVKFDFLGLKTLTVIQNAIDLIRGTGRPLHMAADGRVLYDPPPGA
ENDIGHIPLEDKATYELYAQAKTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGP
MENIPVYCEVKHGLRDLESLHPTIDPILKETQGIIVYQEQVMQIAQVMGGYTLGGADLLR
RAMGKKIAEEMAKERPKFIEGAKKTHGIDAKKAGEVFDLLEKFANYGFNKSHAAAYAVVS
YQTAWLKANHPVEFMAAVMNCDIHLTDKLAVYKREVDKLGIRTVAPCVNASLATFTVRDG
AVVYALGALKNVGVEAMRLIVEARGDRPFATLFDMARRVELKRIGKRPLEMLARAGAFDA
LDRNRARVFEALDALVAYSAAIHEARNSSQVSLFGEAGADIPEPRLPSRDDWLPVERLAQ
EHQAIGFYLSGHPLDDYMGALKRRNVTTLAALTDLAQRGPMVAKLAGAVSSRQEKKSAKG
NRFAFVQLSDPTGLYECTVFSDVLEQARDLLEPGGHVVLTVEATLEGDSLKLLARGVSPI
DAVAADAGAMSLRVHLDRAEAAASVAALLARAQGRARAPVRICVRDPSGGQEIDIELGQD
FAVSPQIRSALRAVPGVEMVEEI
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgctccccgattcatccatctgcgcgtccataccgaatattcgctgctcgag
ggtgcggtgccggtgaagaagctgatcggcctctgcacggccgccgccatgcccgccgtg
gcggtgacggacaccaacgccatgttcgccgcgctggaattctcggtgctggccagcggc
gccgggatccagcccatcgtcggctgtcaggtctcggtcgcctacgagacggtggcgctg
ggcgagcggccgaagccgcccgcgccggtcgtgctgctggcccagaccgagacgggctac
ggcaacctcatgaagctctcctcctgcctctatctcggcaaggagggggcgctgccgcag
gtgacgctgtccgaactcgagcggcatggagaggggctgatctgcctgaccggcggaccg
gacgggccggtgggccggcatctgcgggaggggcagagggcgaaggccgaggcgttgctg
ggccgcctcgccgcgatctatcccgggcggctctatgtcgagttgcagcgccatccgggc
gagggcgggcggctgaccgaggccgagcgtgcgaccgaacccgggcatgtggagctggcc
tatgcgatgggcctgccgctcgtggccacgaacgacgtctattttccgaagcccgagatg
tatgaggcgcacgatgcgctgatctgcatcgccgaaggggcctatgtcgatcaggtggcg
ccgcggcggcggctcacgccgcagcattatttcaagtccgaggccgagatggtcgcgctg
ttcgccgacctgcccgaggcggtggagaacagcgtcgagatcgcgcgccgctgcgccttc
aaggcggccaagcgcccgccgatcctgccgcgcttcgccgacgacgaggtggaggagctg
cggcggcaggccaaggaggggctggccgcgcgcctcgccgtgatcccccatgcggcgccc
gtcgaggactatgaggcgcgcctcgccttcgagctcggcatcatcgagcagatgggcttt
cccggctacttcctgattgtggccgacttcatcaagtggggcaaggccaacggcatcccg
gtgggaccgggacgggggtcgggcgcgggctcgctcgtggcctatgcgctgacgattacc
gacctcgatccgttgcgttaccagcttctcttcgagcggtttctcaaccccgagcgggtg
tcgatgcccgacttcgacatcgacttctgcatggaccgccgcgaggaggtcatccgctac
gtccaggagaaatacggccgcgacaaggtggggcagatcatcaccttcggcgcgctcctc
tcgaaggcggccgtccgtgacgtggggcgcgtcctccagatgccctacgggcaggtggac
cggctgtcgaagatgatcccggtcgagggggtgaagcctgtctcgatccagaaggcgctg
gccgacgagccgcggctgcgcgaggccgcgaagaccgaggaggtggtgaagcggctgctc
gactacgggatgcaggtcgaggggcttctgcgcaacgcctcgacccatgccgcgggcgtg
gtgatcggcgaccggccgctcgacgaactggtgccgctctatcaggatccgcgctcggac
atgcccgccacccagttcaacatgaaatgggtggaagccgcggggctggtgaagtttgac
tttcttggcctgaagacgctgacggtgatccagaacgcgatcgatctgatccgcggcacg
gggcggcccctgcacatggctgcggacgggcgggtgctctacgatccgccgccgggagcc
gagaacgacatcgggcatatcccgctcgaggacaaggccacctacgagctctatgcgcag
gccaagaccgtggcggtgttccaggtcgaaagctcgggcatgatggatgcgctgcgacgc
atgaagcccacctgcatcgaggatatcgtggcgctggtggcgctttatcggccggggccg
atggagaacatcccggtctattgcgaggtgaagcacgggctgcgcgatctcgagagcctg
catccgaccatcgacccgatcctgaaggagacgcagggcatcatcgtctatcaggaacag
gtgatgcagatcgcgcaggtcatggggggctatacgctcggcggcgcggaccttctgcgc
cgcgccatgggcaagaagatcgccgaagagatggccaaggagcgcccgaagttcatcgaa
ggcgcaaagaagacccacgggatcgacgcgaagaaagccggcgaagtcttcgacctgctc
gagaagttcgcgaactacggcttcaacaagtctcacgccgcggcctatgcggtcgtgagc
taccagaccgcctggctgaaggcgaaccatccggtcgagttcatggccgcggtgatgaac
tgcgatatccacctgaccgacaagctcgccgtctacaagcgcgaggtggacaagctcggc
atccgcacggtggccccttgcgtgaacgcctcgctcgccaccttcacggtgcgtgacggc
gcggtggtctatgcgctgggcgcgctgaagaacgtgggcgtcgaggcgatgcggctcatc
gtcgaggcgcgtggcgaccgccccttcgccacgctcttcgacatggcgcggcgggtggag
ctgaagcggatcggcaagcgcccgctcgagatgctggcgcgcgccggcgccttcgacgcg
ctcgaccgcaaccgcgcccgggtgttcgaggcgctggatgcgctggtggcctattccgcc
gccattcacgaagcgcgaaattcgagccaggtgtcgctgttcggcgaggcgggggcggac
atccccgagccgcggctgccgtcgcgcgacgactggctgccggtcgagcggctggcgcag
gagcatcaggcgatcggcttctatctctcgggccatccgctcgacgattacatgggcgcg
ctgaagcggcgcaacgtcaccacgcttgccgcgctgaccgatctggcgcagcgggggccc
atggtggccaagctcgccggtgccgtctcgtcgcggcaggagaagaagtcggccaagggc
aaccgcttcgccttcgtccagctttcggatccgacggggctctacgaatgcaccgtcttc
tcggatgtgctcgagcaggcgcgcgacctgctggagccgggcggccatgtggtgctgacc
gtcgaggccacgctcgagggcgacagtctgaagctcctcgcgcgcggggtctcgcccatc
gatgcggtggcggccgatgcgggcgcgatgagcctgcgcgtccatctcgaccgtgccgag
gccgcggcctcggtggcggcgctgctggcccgtgcgcagggccgcgcccgggcgccggtg
cggatctgcgtccgcgatccgtcgggcgggcaggagatcgacatcgagctcggtcaggat
ttcgccgtctcgccgcagatccgcagcgcgctccgcgccgtgccgggtgtggagatggtc
gaggagatctag
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