Cereibacter sphaeroides KD131: RSKD131_4064
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Entry
RSKD131_4064 CDS
T00844
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsk
Cereibacter sphaeroides KD131
Pathway
rsk03030
DNA replication
rsk03430
Mismatch repair
rsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSKD131_4064
03430 Mismatch repair
RSKD131_4064
03440 Homologous recombination
RSKD131_4064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsk03032
]
RSKD131_4064
03400 DNA repair and recombination proteins [BR:
rsk03400
]
RSKD131_4064
Enzymes [BR:
rsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSKD131_4064
DNA replication proteins [BR:
rsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSKD131_4064
DNA repair and recombination proteins [BR:
rsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSKD131_4064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
ACM03924
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All DBs
Position
2:1001184..1002065
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AA seq
293 aa
AA seq
DB search
MRTMIPEGDFRFIALDVETACSDAGSICQIGLACVFPDNRIHTFSTLVNPGTRFDPFNVR
LHGIGPDHVSGALRFDELLDHLFPLLSRHHLVQHSNFDKQALNAACRSCGREPPDFRWAD
SVTIARRAWPELLRNGGHGLGNLKRVLGLDFNHHDAGEDARAAALVVLHAETHLNLTFEE
LIKPARKNHPAAITREGDPTGALSGSVVVFTGALSMSREEAAAAAARVGMDVKSSVTNKT
TYLVVGDQDLNVLAGHTKSSKHRRAEEMQSAGHPIQIVGETEFRTLVTNAAVS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccatgatccccgagggcgatttccgcttcatcgcgctggacgtggaaacggcc
tgcagcgacgcgggtagcatctgccagatcggactggcctgtgtgttccccgacaaccgg
atccacaccttctcgacgctcgtgaaccccggcaccaggttcgaccctttcaacgtccgg
cttcacggcatcggccctgaccatgtgtccggcgcgctccgattcgatgaactcctcgat
caccttttcccgcttctctcacggcatcatctggtccagcacagcaacttcgacaaacag
gccttgaatgcggcttgtcgctcgtgtgggagagagccgccggattttcgctgggcggac
agtgtcactatcgcacgccgggcctggccagaactgctcagaaatggcggtcatggcctc
gggaacctgaagcgagtgctcggcttggacttcaaccatcacgacgccggcgaagacgcg
cgcgcggccgctctggtggtcctgcatgctgaaacgcacctcaacctgacattcgaagaa
ctgatcaaaccggcgaggaaaaaccatccagccgccatcacgcgggagggagatccaaca
ggcgcgctctccggctcagtcgtcgtgttcaccggcgcactgagtatgtcgcgcgaagag
gcggcggcagcggccgcgcgtgtaggcatggacgtcaagtcctcggttacgaacaagaca
acctacctggtcgtcggcgaccaggatctgaacgtccttgccggacacacgaagagcagc
aagcaccgacgcgccgaggagatgcagagcgccggccacccgatccagatagttggtgag
accgagttcaggacgctcgtgaccaacgcggcggtgtcctga
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