Cereibacter sphaeroides KD131: RSKD131_4508
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Entry
RSKD131_4508 CDS
T00844
Name
(GenBank) YD repeat protein
Organism
rsk
Cereibacter sphaeroides KD131
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
ACM04368
LinkDB
All DBs
Position
pRSKD131B:complement(35395..40458)
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AA seq
1687 aa
AA seq
DB search
MTSSQYQGSQAYNQSLQSNEYINRNTGSLVVSLPLVQLRGITDAIGLSLTLGYSAGASGQ
LGLPQGWGWGLPFVAAGQSLTVEGKTFVIDPSWTDSSGYQSGLRYLNDHGRLFQTVVPPQ
PVPGGGGTYGFMLRYDDGSISYFDATGKLIAHADLYGNMLRYAYTNPLGDVFQNSLASIT
DSFGQVVTFGYSGGTIVLTLPDGSSVTVAFSSQGVQHVTNQIGAVTAFSYASASGTTVVG
AITYPTGMTTTLAYTGLRYIDAGGNSGTRPAVQSMTRTGPGGAFLDRSDYSYGTASGGNT
YTGATAGYRMGTASDGLMDSNNTAYQYDVLEQRRDAGGALIAANRVFFNYLHCPLTEHAY
LVDANGHAQEAHRTSYTYDIVTDAHARSVNMNKPVTTVHSVYDAAGGTWSDNSQADVAYD
LYGKITSSSQYDLSSGRPRLTGQRTHSFLQVAWGGEMPQRTDYVDAVTGQTTRIDYGLTA
DQKSIAATTVSTQAAGAGSFAPYKTKTFQFDPRGCQTGWTLTWAQGYSGPRGSVASVGEQ
TSYSYDAASHQLTVDTTDANGHTRVAVFDMRLPGGPCLSQTKPGGARRSYAYDPLARLMQ
ETDPLGDVTTHAYTLAGNGGGGTNTSTVTQSNGYVLCTTYDAKGRAVLMMDNGDPTQSTP
SLSRTLRRVSFNALDLKASETDATEQTLTISYDALGRQIALADALGNQSTTIFDDAARTV
STSMNGDLRTVITRDGLGNTIQTDTHADSGSPQAGQVQRVTSAYDGFGQVVTETHFSITG
GNVVQNSVKTFTYTPDGNPEVVDFTGTPATAALQATRCTTTQRDLNGNPILVTRNVSYNG
AAQPLVVSETLTYDPVGNLIEIRNQAGQIERLSYTTDSALQSRTRYDGTQTTYSYDAAGQ
VLSETTNGQTRTFAYLSNGRIDHITDPSGTLRYAYSLDGTASSVTYPDGKTLSLTKDATS
RVVSMTLPDGTAASYSYNTLNQIIAQTMGGVTLSNTWGTANHANGVLLKQVLGGATAQTT
QFGYDGFGANDSVAVTDGAGIGVLSAAATRDGWRNLVSLTLASAVNTDPSVNVAKTMSYD
GLKQLVGITLTPSGGGSPTQVSYAYDGAANVLTRTRNGQQERFAYNALNQITSGAAAYDA
NGRMVRDVDGSTYGFDPLDRLTNVGMASGPTMSNSYGPQGALASVIDGSTEDRFYPLAGT
MVSVAANAQSGTPEWHGLMWAGQMPVARVSAGSVTAYAAASKSVYVHRTSASSNALAISA
YGTVTPQSALDRANSFNWNSQFTDPVSNLTYLRARWYNPETMRFLSLDPRITMNRYAYAM
GNPIANSDPLGQSWEEIVGLIAGAIVGIGATVLTGGVAGAAAAAVFGTECVAASIGAGAL
AGAVGSVAGDLTSAAISGQKITGARVGIDLLSGAVGGAVGAGLGGAAGRVAMRGALNAGW
SQAAITRVGLITSGAIGGLTGAAASAGVTSVAYQQPFFSTGNIVSMAVGFGAGAGGGILM
SGAYLGKINAKIIPVPIGEDELHLITPAVDTRGAVGENERLLVMAPQPEAETSANGFQRR
PGGYKYAMRLDFGEGEGEGRPLMAPGREESVDTIAGHGAGNTIFASVDVSGDGAPDFVRP
ISGRNFARYLVDEGWREREGPIKLMSCFGAFRNARVIADTLGRDVWAGYPELDRYSFTGW
VRFPAPH
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtcgcaatatcagggctcgcaggcctataaccagtcgctgcaaagcaacgaa
tacatcaacaggaataccgggtcgctggtggtgtcgctgccgctggtgcagttgcgcggg
atcaccgacgccatcggcctgtcgctgacgctgggctattccgcgggggcgtcgggccag
ctgggcctgccgcagggctggggttgggggctgcccttcgtcgccgccgggcaatcgctg
acggtcgagggcaagacctttgtcattgaccccagctggaccgacagttcgggctatcag
tccggcctgcgctatctgaacgaccatgggcgcctgttccagactgtcgtcccgccgcag
cccgttccgggcggcggcgggacatacgggttcatgctgcgctatgacgacggatcgatc
agctatttcgacgccacgggcaagctgatcgcgcatgccgacctttacggcaacatgctg
cgctatgcctataccaacccgctgggcgacgtgttccagaacagcctagccagcatcacc
gacagtttcggccaggttgtcacgttcggctattccggcggcacgatcgtgctgaccctg
cccgacggatcgagcgtgaccgtggcgttttcgagccagggtgtacagcatgtcaccaac
cagatcggcgcggtcaccgccttcagctatgcctcggcctcgggcacgacggtcgtcggc
gcgatcacctatcccaccgggatgacaacgacgctggcctacaccggcctccgctacatc
gacgccggagggaattccggcacccgcccggccgtgcagtcgatgacccggaccggaccc
ggcggcgcgttcctggaccggagcgactacagctatggcaccgcatcgggcggcaatacc
tataccggtgcaaccgcggggtaccggatgggaacggcctcggacgggctcatggacagc
aacaacaccgcctaccagtacgacgtgctggaacagcgccgcgacgcgggcggcgcactc
attgccgccaaccgggtgttcttcaactacctgcactgcccgctgacggagcatgcctat
ctggtggacgcaaacggccatgcgcaagaggcgcaccgcacctcctatacctacgacatc
gtcaccgacgcccatgcgcgaagcgtgaacatgaacaaaccggtgacgacggtgcacagc
gtctatgacgcggcgggcggcacgtggtccgacaattcgcaggcagatgtcgcctatgat
ctttatggaaagatcacgtcgagcagccagtacgacctgagcagcggcagaccccggctg
accggccagcggacgcacagctttctccaggtcgcgtggggaggcgagatgccgcagcga
accgactacgtcgatgcggtcaccggccagacgacgcggatcgactatgggctgacggcc
gaccagaaatccatcgccgccaccaccgtctctacccaggcggcgggcgcgggcagtttc
gccccctacaagaccaagaccttccagttcgatccccggggctgccagaccggctggacc
ctgacctgggcccagggctacagcggtcccagggggtcggtcgcttcggtcggcgaacag
acctcctacagctatgatgccgcgtcgcatcagctgaccgtcgacacgactgacgccaac
ggccacacccgggtcgcggtcttcgacatgcgcctgccgggcggaccctgcctgagccag
accaaacccggcggcgcgcggcgcagctatgcctacgacccgctggcgcgcctgatgcag
gaaaccgacccgctgggcgatgtcacgacccatgcctacactctggccggaaacggtggc
ggcggcaccaacaccagcaccgtgacccagtccaacggctatgtcctctgcacgacctac
gatgcaaaggggcgcgccgtcctgatgatggacaatggcgatccaacccaatcgacgccc
agcctgtcgcgtaccctgcgccgcgtgagtttcaatgcgctggatctgaaggcgagcgag
accgacgccaccgaacagaccctgacgatcagctatgacgcgctgggacgtcagatcgcc
ctggccgatgccctgggcaatcagagcacgaccatcttcgatgacgcggcccgaacggtc
agcacctcgatgaacggcgatcttcgcacggtcatcacccgtgacgggctgggcaacacg
atccaaaccgacacccatgccgacagcggctcaccccaggcgggccaggtgcagcgcgtg
acctcggcctatgacggctttggccaagtggtgaccgaaacgcacttcagcatcaccggc
ggcaacgttgtgcagaattcggtcaagaccttcacctatacgccggacggcaatcccgaa
gttgtggatttcaccggcacccccgcgaccgccgcgttgcaggcgacgcgctgcaccacc
acgcagcgcgacctgaacggcaatccgatccttgtcacccgcaacgtcagctataacggc
gcggcgcagcccctcgttgtcagcgagacgctgacctatgatccggtcggcaacctgatc
gagatccggaaccaggccgggcagatcgaacggctgagctacacgaccgacagcgccctg
caaagccgcacccgctatgacggcacccagacgacctattcctacgacgccgcaggccag
gtgctgagcgagaccacaaacgggcagacgcgcacctttgcctatctttcgaatggcagg
atcgaccatatcaccgatccgagcggcaccttgcgctatgcctactctctggacggcacg
gcctcgtccgtgacctatcccgatggcaagacgctgtcgctgaccaaggacgccaccagc
cgggtggtgtcgatgaccctgcccgatggcaccgcggcaagctattcgtacaacaccctg
aaccagatcatcgcgcagaccatgggcggggtcacactgagcaacacctggggcacggcc
aaccacgccaacggcgtgttgttgaaacaggtgctgggcggcgcgacggcgcagaccacg
cagttcggctatgacggattcggggcaaacgacagcgtcgcggtcaccgacggcgcgggc
atcggcgtcctgagcgccgccgccacccgcgacggctggcggaacctggtgtcgctgacg
ctcgcctcggctgtgaacaccgatccttcggtgaacgtcgcgaagacgatgagctatgac
ggcctgaagcagctggtggggatcacgctgaccccgtccggcggcgggtcgccgacccag
gtaagctatgcctacgacggcgccgccaacgtgctgacccgcacccggaacggccagcag
gaacgctttgcctacaacgctctgaaccagatcacctcgggcgctgccgcctatgacgcc
aatggccgcatggtcagggacgtggacgggtcgacctatggtttcgacccgctcgaccgg
ctgaccaatgtgggcatggcctcggggcccacgatgtccaacagctatggtccgcagggc
gcgctggcctcggtgatcgacggcagcaccgaggacaggttctatccgctggccgggacc
atggtcagcgtggcggcgaatgcccagtcgggcacgccggaatggcacgggctcatgtgg
gcgggacagatgcccgtcgcgcgggtcagcgccggatcggtcaccgcctatgcggcagcg
tcgaaatcggtctatgtgcaccgcacctcggccagcagcaacgctctggccatctcggcc
tatggcacggtcacaccgcaatccgcgctcgaccgcgccaacagcttcaactggaattcg
cagttcaccgacccggtcagcaacctgacctatctcagggcgcgctggtacaacccggaa
accatgcgcttcttgtcgctcgatccgcgcatcaccatgaaccggtacgcctatgccatg
ggcaacccgatcgcgaactccgacccgctgggccagagctgggaagagatcgtggggctg
atcgccggggccatcgtcggcatcggcgcaaccgtgctgaccggcggggtcgctggcgca
gccgcggcggcggtctttggcaccgaatgcgtggccgccagcatcggcgcgggcgcgctg
gcgggtgccgtgggctcggtcgcgggggatctgaccagtgccgcgatctcgggccagaag
atcaccggcgcgcgggtcggcatcgacctgctgagcggcgcggtggggggcgcggtgggc
gcgggcctgggcggcgcggcgggccgggtcgcgatgcgaggggcgctgaacgcgggctgg
tcgcaggcggcgatcacccgcgtcggcctcatcacctcgggcgccatcggcgggctgacc
ggggccgccgcctcggccggggtcacctcggtcgcctatcagcagccgttcttctcgacc
gggaacatcgtcagcatggcggtgggctttggcgccggcgcgggtggtgggatcctgatg
tcgggcgcctatctgggcaagataaacgccaagatcattccggtgcccatcggcgaggac
gaactgcacctgatcaccccggcggtcgacacgcgcggcgcggtgggcgagaacgagcgc
cttctggtgatggcgccgcagcccgaggccgaaaccagcgccaacggattccagaggcgc
ccgggcgggtacaaatacgcgatgcggctggatttcggcgagggcgaaggcgagggccgc
ccgctgatggcgccggggcgcgaggaatcggtggacaccatcgccgggcatggcgcgggc
aacaccatcttcgccagcgtcgatgtgagtggcgacggagcccccgatttcgtacgcccg
atctcgggccgcaactttgcccggtatctcgtggacgagggctggcgcgagcgtgagggg
ccgatcaagctcatgtcctgctttggcgccttccgcaatgcacgggtcatcgccgacacg
ttgggccgcgatgtctgggcgggttatcccgagctcgaccgctattccttcaccggctgg
gtccgctttccggcgccgcattag
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