Ralstonia solanacearum PSI07: RPSI07_0159
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Entry
RPSI07_0159 CDS
T01273
Symbol
solR
Name
(GenBank) Transcriptional activator protein solR
KO
K19666
LuxR family transcriptional regulator, quorum-sensing system regulator SolR
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl02020
Two-component system
rsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPSI07_0159 (solR)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPSI07_0159 (solR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsl03000
]
RPSI07_0159 (solR)
Transcription factors [BR:
rsl03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RPSI07_0159 (solR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4
HTH_20
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CBJ49537
LinkDB
All DBs
Position
complement(172335..173045)
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AA seq
236 aa
AA seq
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MEPSFQDAYHAFRTAQDERQLFREITSIARQLGFDYCCYGVRMPLPVSKPAVAIFDTYPA
GWMQHYQASGFLEIDPTVRAGASSSDLIIWPVSIRDEAMRLWSDARDFGLNIGVARSSWT
ARGAFGLLTLARHADPLTAAELDRLSATTNWLANLAHTLMSPFLMPKLVPESNAVLTARE
REVLCWTGEGKTAYEIGQILRISERTVNFHVNNVLLKLAATNKVQAVVKAIVIGLI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaagtttccaggacgcgtatcacgcgttccgtacagcgcaggacgagcgccag
ctctttcgggaaatcacgtcgatcgcccggcaactcggctttgactactgctgctacggt
gtccgcatgcccttgccggtctccaagcccgccgtcgccatcttcgatacgtatccggcg
ggctggatgcagcactaccaggccagcggtttcctggaaatcgatccgaccgtgcgcgcc
ggcgcgagcagcagcgatctgatcatatggcccgtgtccatccgcgacgaagccatgcgg
ctgtggtcggacgcacgcgatttcggcttgaacatcggcgtcgcgcgctcaagctggacg
gcgcgtggcgcgttcggcctgctgacgctggcccgccacgccgatccgctcacggcggcc
gagctcgaccggctgtcggccaccaccaactggctggccaacctggcgcatacgctgatg
agcccgttcctgatgcccaagctggtgcccgaatccaacgcggtgctgaccgcgcgcgag
cgcgaagtgctgtgctggacaggcgaaggcaagaccgcctacgagatcggacagatcctg
cgcatctccgagcgcacggtcaatttccacgtcaacaacgtgctgctgaagctggcggcc
accaacaaggtacaggcggtcgtcaaggcgatcgtcatcggcttgatctag
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