Ralstonia solanacearum PSI07: RPSI07_0505
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Entry
RPSI07_0505 CDS
T01273
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit; RNA polymerase alpha chain family
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPSI07_0505 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsl03021
]
RPSI07_0505 (rpoA)
03400 DNA repair and recombination proteins [BR:
rsl03400
]
RPSI07_0505 (rpoA)
Enzymes [BR:
rsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPSI07_0505 (rpoA)
Transcription machinery [BR:
rsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPSI07_0505 (rpoA)
DNA repair and recombination proteins [BR:
rsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPSI07_0505 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CBJ49872
LinkDB
All DBs
Position
492505..493485
Genome browser
AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYASTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEI
INPGHVIASLSAGGKLDMQIKVEQGRGYVPGNVRKFGDESSKVIGRIVLDASFAPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAA
AARAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctgaagcccaaaattattgcggttgagccgcttggcgatcatcac
gcgaaggtcgtcatggaaccgttcgagcgtggctacggccatacgctcggcaacgcgttg
cgccgcgtgctgctgtcgtcgatggttggctacgcgtcgaccgaagtgacgatcgctggg
gtcgtccacgaatattccaccatcgacggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaaaggcgtggtgttcaagctgcacaaccgtgacgaggtcacggtgtcgctgcgc
aaggaaggcgaaggcgtcgttaccgcggcggatatcgaactgccgcacgacgtcgagatc
atcaatccgggccacgtcatcgccagcctgtcggccggtggcaagctggatatgcagatc
aaggtcgagcaaggtcgcggctacgtgccgggcaacgtgcgcaagttcggcgacgagtcg
agcaaggtgatcggccgcatcgtgctcgacgcgtcgttcgcgccggtgcgccgcgtgtcg
tacgcagtcgagtctgcccgtgttgagcagcgtaccgacctcgacaagctggtgatgaac
atcgagaccaacggcgtgatctcgccggaggaagcgatccgccagtcggcgcgcatcttg
gtcgaccagttgtcggtgttcgcggcgctggaaggcaccgagagcgctgccgaggccgct
gccgcccgcgcaccgcagatcgatccgatcctgctgcgcccggtcgacgacctggagttg
accgtccgctcggcgaactgcctgaaggccgaaaatatttactatattggcgacctgatc
cagcgtaccgagaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagtcctcgcttcgcgtggcctgacgctcggcatgaagctcgagaactggccg
cccgcaggcctggagaagtaa
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