Ralstonia solanacearum PSI07: RPSI07_0730
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Entry
RPSI07_0730 CDS
T01273
Name
(GenBank) putative Exoribonuclease II (rnb)
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rsl
Ralstonia solanacearum PSI07
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsl03016
]
RPSI07_0730
Enzymes [BR:
rsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RPSI07_0730
Transfer RNA biogenesis [BR:
rsl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RPSI07_0730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CBJ50093
LinkDB
All DBs
Position
730897..732978
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AA seq
693 aa
AA seq
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MQLLFEEGGEIRAGTVLSQQGEAYQVELPSAKRTKVKSRDVLLQFAQPSAGELAQVAQAL
SADIDLDFLWECAPAEEFGFTDLAGEYFGTDADATQQAALAIALHGSPIYFRRKGRGRYQ
RAPEDQLKAALAGLERKKQQAAQQAAYEAELKAMRLPEAFRGKALQLLFKPDKNSIEYKA
FDAACTALGMPPMRLMVAVGGIANARALHEARFLSECFPKGTGFPDVTVPEPALDLPAAD
VRAFSIDDVTTTEIDDAISVTPLDAATVRIGIHIAAPGFGIQRSDALDAIARQRLSTVYF
PGDKITMLPESVVDRYTLQEGRACPALSLYATVDRATWTVTASETRCETVTVAANLRHNL
LDGIITAEALADGTGDYPFKDELTVLWPFACALYDARQQARIASGLKPEGAQKGDYSFYL
DPIPEAEGGGERIRIEQRKRGSPLDKIVAELMILANSTWGRMLADAGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIAAVAQHGVTAKLIAPFKPKDA
DLLAAVADFEATYAAYAAHQSTMERYWCLRWLRQEARTRTQAVVLKDGMVRFAEIPLMTR
VPELAQTARGTHVVLDVLEIDEIGLEVSCRVVEVLAPAADAEVEAAALEDELAQAEAEAP
AEPQPAADGEEARAETGDAVAPPQQDDGTPAVS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgtttgaagaaggcggcgagatccgcgcaggcaccgtcttgtcccagcag
ggcgaggcctaccaggtcgaattgccgagcgccaagcgcaccaaggtcaagtcgcgtgac
gtgctgctgcagttcgcccagccgtcggccggcgaactggcgcaggtcgcgcaggcgctg
tcggcggacatcgacctggatttcctatgggaatgcgcgcccgccgaggagttcggcttt
accgatctggccggcgagtactttggcaccgacgccgatgccacgcagcaggccgcgctg
gccattgcgctgcacggctcgcccatctatttccggcgcaagggccggggccgctatcag
cgggcgcccgaagaccagctcaaggcggcactcgccgggctggagcgcaagaagcagcag
gccgcgcagcaggccgcctatgaagccgagctgaaggccatgcgcctgcccgaagccttc
cgaggcaaggcgttgcagctgctgttcaagcccgacaagaacagcatcgaatacaaggcg
ttcgatgccgcgtgcacggcgctcgggatgccgccgatgcggctgatggtggcggtcggc
ggtatcgccaatgcgcgcgcgctgcacgaggcgcgtttcctgtcggagtgcttcccgaag
ggcaccggttttcctgacgtgacggtgccggagccggcgctcgacctgccggctgccgac
gtgcgcgcgttctccatcgacgatgtgaccaccacggaaatcgacgatgcgatttcggtc
acgcccctcgacgcggccacggtgcgcatcggcatccacatcgcagcgcccggcttcggc
atccagcgcagcgatgcgctcgatgcgatcgcgcgccagcggctgtccaccgtgtacttc
cccggcgacaagatcaccatgctgccggagtcggtggtggatcgctacacgctgcaggaa
gggcgtgcatgcccggcactgtcgctgtatgcgacggtcgatcgcgccacctggacggtg
accgccagcgagacgcgctgcgagaccgtgacggtggcggccaacttgcgccacaacctg
ctggacgggatcatcacggccgaggcgctggccgatggcaccggcgactacccgttcaag
gacgaactcaccgtcctgtggccctttgcgtgcgcgctgtacgacgcccgccagcaggca
cgcatcgccagcggcctgaagccggagggcgcacagaagggcgactacagcttctacctg
gacccgattcccgaagccgagggtggcggcgagcgcatccgcatcgagcagcgcaagcgt
ggctcgccgctggacaagatcgtcgccgagctgatgatcctcgccaacagcacctggggc
cgcatgctggccgacgccggcgtgccgggcatctaccgcacgcagaaggcgtggggcatg
caccgcacgcgcatgcagacctatccggcgccgcacgaggggctgggcgtggcgcagtat
gcgtggagtacctcgccgctgcgccgctacgtcgatctggtcaatcagtggcagatcgcg
gcggtggcacagcacggcgtgacggccaagctgatcgcgcccttcaagccgaaggatgcc
gacctgctcgctgccgtggccgacttcgaagccacgtatgccgcctatgctgcgcaccag
tcgaccatggagcgctattggtgcctgcgctggctcaggcaggaagcgcgcacccgcacg
caggccgtggtgctgaaggacggcatggtgcgctttgccgagatcccgctgatgacccgg
gtgccggagctggcgcagaccgcgcgcggcacgcatgtcgtgctcgatgtgctggagatc
gacgagatcggcctggaggtgtcgtgccgcgtggtcgaggtgcttgccccggcagcggat
gccgaggtggaagccgccgcgctggaagacgagctcgcgcaagctgaggcggaagcacct
gccgagccccaaccggccgccgatggggaagaagcccgcgccgagacgggcgacgctgtg
gcgccgccgcagcaggacgatggaacgccagccgtcagctaa
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