Ralstonia solanacearum PSI07: RPSI07_0890
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Entry
RPSI07_0890 CDS
T01273
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPSI07_0890 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsl03019
]
RPSI07_0890 (pcnB)
Enzymes [BR:
rsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RPSI07_0890 (pcnB)
Messenger RNA biogenesis [BR:
rsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RPSI07_0890 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
PrnB
DUF2204
Motif
Other DBs
NCBI-ProteinID:
CBJ50250
LinkDB
All DBs
Position
complement(898224..899771)
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AA seq
515 aa
AA seq
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MIKKLINRLLGRPGAETAHATEPGTPAKKGRAPKTPKSRAKAAAGGVPRAPRVWNVEAHG
IDPKLLSRNAVKVTSTLQEAGYDAFIVGGAVRDLLLGIQPKDFDVATNATPEQVEALFRR
SRIIGRRFQIVHVTFYGGREQEIIEVSTFRALVDAVESEQVPAGKRVKRTELDHHTHAVD
ASGRVLRDNVWGTQAEDATRRDFTVNAMYYNPADQTVHDYHHGMEDMRARLLRMIGDPHT
RYREDPVRMLRVVRFAAKTGFDIDPATRAPIAELGPLIHNVPAARLFDEMLKLLMSGHAW
ASLQELRKAGLHSGLLPLLDVALEQPMGQRFVQLALDNTDERVKAGKPVSPGFLFASLMW
HHVLEHWNRRRAAGEPLIPALHTAMDEVLDRQTEQLAIQRRFTADMKEIWSMQPRFEKRT
GRMPYRLLELPRFRAGYDFLALRCASGELPQELATWWTDFQNGDGDAREALIAQAKQAPA
AAGGSTGGVKRRRRRRGPAKSDTVADVSPGSSEGT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcatcaatcgcctgctgggcaggcccggcgcggaaaccgcgcacgcc
accgagcccggcacgccggccaagaagggccgcgcgcccaagaccccgaagtcgcgcgcc
aaggccgccgccggtggcgtaccgcgcgcgccccgcgtatggaacgtggaagcgcacggc
atcgatccgaaactgctgtcgcgcaacgccgtcaaggtcacttccacgctgcaggaagcc
ggctatgacgccttcatcgtgggcggcgcggtgcgcgatctgctgctgggcatccagccg
aaggacttcgacgtcgccaccaacgccacccccgagcaggtggaggcgctgttccgccgc
tcgcgcatcatcggccggcgcttccagatcgtgcacgtgacgttctacggcggacgcgag
caggaaatcatcgaggtctcgaccttccgcgcgctggtcgatgccgtggaaagcgagcag
gtgccggccggcaagcgcgtcaagcgcaccgagctggaccaccacacccacgccgtcgac
gccagcggccgcgtgctgcgcgacaacgtgtggggcacgcaggccgaggatgccacccgc
cgcgacttcaccgtcaacgcgatgtactacaacccggccgaccagaccgtgcacgactac
caccacggcatggaagacatgcgcgcgcgcctgctgcgcatgatcggcgacccgcacacg
cgctaccgcgaagacccggtgcgcatgctgcgcgtggtgcgcttcgcggccaagaccggt
ttcgacatcgacccggccacgcgcgcgccgatcgccgaactgggcccgctgatccacaac
gtgccggccgcgcggctgttcgacgagatgctcaagctgctgatgtcgggccacgcctgg
gcgtcgctgcaggagctgcgcaaggccggcctgcacagcggcctgctgccgctgctggac
gtggcgctcgaacagccgatgggccagcgcttcgtgcagttggcgctcgacaataccgat
gagcgcgtcaaggccggcaagccggtctcgcccggcttcctgttcgcctcgctgatgtgg
caccacgtgctggagcactggaaccgccgccgcgccgccggcgagccgctgatccccgcg
ctgcacacggcgatggacgaagtcctcgaccgccagaccgagcagctcgccatccagcgc
cgcttcaccgccgacatgaaggagatctggagcatgcagccgcgcttcgagaagcgtacc
ggccgcatgccctaccgcctgctggaattgccgcgcttccgcgccggctacgacttcctg
gccctgcgctgcgcctcgggcgaattgccgcaggagctcgccacctggtggaccgacttc
cagaacggcgacggcgacgcgcgcgaagcgctgatcgcgcaggccaagcaggcgccggcc
gcagccgggggttccaccgggggtgtcaagcgccgccgccgccggcgtggtccggcaaaa
tcggatacagtcgccgacgtgagcccgggcagttcggagggaacgtga
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