Ralstonia solanacearum PSI07: RPSI07_1192
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Entry
RPSI07_1192 CDS
T01273
Symbol
polA
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03030
DNA replication
rsl03410
Base excision repair
rsl03420
Nucleotide excision repair
rsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPSI07_1192 (polA)
03410 Base excision repair
RPSI07_1192 (polA)
03420 Nucleotide excision repair
RPSI07_1192 (polA)
03440 Homologous recombination
RPSI07_1192 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsl03032
]
RPSI07_1192 (polA)
03400 DNA repair and recombination proteins [BR:
rsl03400
]
RPSI07_1192 (polA)
Enzymes [BR:
rsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPSI07_1192 (polA)
DNA replication proteins [BR:
rsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RPSI07_1192 (polA)
DNA repair and recombination proteins [BR:
rsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RPSI07_1192 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPSI07_1192 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CBJ50551
LinkDB
All DBs
Position
1213454..1216288
Genome browser
AA seq
944 aa
AA seq
DB search
MSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACV
FDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEADDVIGTL
TERAAREGIRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGVLAKFGVPPEKIVDYLS
LIGDTVDNVPGVPKVGPKTAVKWLGEYGSLDNVIARAGEIKGVVGENLRNTLDWLPKGRE
LLTVKIDCDLATEVPTLEALVDGGEDRAKLVDFFSRYGFKTWLREAAGESLPDTRSVGAA
RKAATPVKQYAPEAAAQQQASLFDVETPPAEVKYETVTTEAQLESWMRLLDTVELVCIDT
ETTSIDPMLAQLVGISLSVQPGQACYIPVAHRGPDVSGLDNAAQLSREAVLARMKLWLED
ETRKKVGQHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHGMDALAERVLHLKTIT
YEEVCGKGAAQIGFDEVALDRATEYAAEDADITLRLHRALYPKVTEDDKLRYVYEQIEMP
TSIVLQKMERNGVLVDAERLARQSAELGQRLLELEQQAFALAGQPFNLNSPKQIGELFFT
QLKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNPQT
GRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPAGSVIVSADYSQIELR
IMAHLSEDEGLMRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYAKVINFGLIYGMSAFG
LASNLGIGRDAAKLYIDRYFARYPGVARYMDETRQVAHERGYVETVFGRRLWLPDINGGN
GPRRQAAERAAINAPMQGTAADLIKLSMLAVQDWLEGSPNAGKPGVPMRTRLVMQVHDEL
VLEVPQDELARVRERLPELMCDVASLRVPLVAEVGVGSNWEEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaagtcaagaaacgctgttgctcgtcgatggctcgagttatctgtaccgtgct
tatcacgcactgcccgacttgcgcaatggagaagggtttcctacgggggccatctacggc
atcgtgaacatgctgcgcaaactgcgcaacgactacccggccaagtatagcgcttgcgtt
ttcgacgctaaaggcaagaccttccgcgacgagctgtaccccgcctacaaggagcaccgg
gcgccgatgcccgatgacctgcgccagcagatcgagcccatccacgaagccgtgcgcgcg
ctcggctggcccatcctggtggtcgacggcgtggaggccgacgacgtgatcggcacgctg
accgaacgcgccgcccgggagggcatccgcaccgtcgtctcgaccggcgacaaggacctc
gcccagttggtgaatgaccatgtcacgctggtcaacaccatgagcaacgagacgctcgat
ccggccggcgtgctggccaagttcggcgtgccgcccgagaagatcgtggactatctgtcg
ctgatcggtgacaccgtggacaatgtgccgggcgtgcccaaggtggggccgaagacagcg
gtcaagtggctgggcgaatacggctcgctcgacaacgtgatcgcccgcgccggcgagatc
aagggcgtggtcggcgagaacctgcgcaacacgcttgactggctgcccaagggccgcgag
ctgctgaccgtcaagatcgactgcgatctcgcaacggaggtcccgaccctcgaagccctc
gtcgatggcggcgaggatcgcgccaagctggtcgacttcttcagccgctacggcttcaag
acttggctgcgcgaggccgccggcgaatcgctgccggatacccgcagcgtgggcgcggcg
cgcaaggccgccacgcccgtcaagcaatacgcaccggaggccgcggcgcagcaacaggcc
agcctgttcgacgtcgaaacgccaccggccgaagtcaagtacgaaaccgtcaccaccgaa
gcgcagctcgagtcctggatgcggttgctggacacggtcgagctcgtctgcatcgatacc
gagacgacctcgatcgacccgatgctggcgcagctggtcggcatctcgctgtcggtccag
ccgggccaggcgtgctacatcccggtcgcgcaccgcgggcccgacgtatcggggctggat
aacgccgcgcagctgtcgcgcgaggccgtgctggcgcgcatgaaactgtggctggaggac
gagacccgcaaaaaggtcggccagcacctgaagtacgacgcgcacgtgttcgccaaccat
ggcatcgcgctgcgcggcatcgcgcacgacaccatgctgcagtcgtacgtgctggcctcg
caccgcaaccatggcatggacgcgctggccgagcgcgtgctgcacctgaagaccatcacc
tacgaagaggtctgcggcaagggcgcggcgcagatcggcttcgacgaagtggcgctcgac
cgcgccaccgaatatgccgccgaagacgccgacatcacgctgcgcctgcaccgcgcgctg
tatcccaaggtgaccgaggatgacaagctgcgctacgtctacgagcagatcgagatgccg
acctccatcgtgctgcagaagatggagcgcaacggcgtgctggtcgatgccgagcgcctg
gccaggcagagtgccgaactgggccagcgcctgctggagctcgagcagcaggccttcgcc
ctggccggccagccgttcaacctgaactcgcccaagcagatcggcgagctcttcttcacg
cagctcaagctgccggtggtcaagaagaccgccagcggcgcgccgtcgaccgacgaggaa
gtgctgcagaagctggccgaggactacccgctgcccaagctgctgctcgacttccgcggc
ctggccaagctcaagtccacctacaccgacaagctgccgaagatggtcaacccgcagacc
ggccgggtccacaccacctacgggcaggcgaccgccgttaccggccggctggcctcgacc
gacccgaacctgcagaacattccggtgcgcacggaagaagggcggcgcatccgcgaggcg
ttcgtggcgccggcgggcagcgtgatcgtctcggccgactactcgcagatcgagttgcgc
atcatggcccacctgtccgaggacgaaggcctgatgcgcgccttccgcgaaggccaggac
gtgcaccgcgccaccgcggccgaagtcttcggcgtgacaccgctggaggtcacagccgag
cagcgccgctacgccaaggtcatcaacttcggcctcatctacggcatgagcgcattcggg
ctggcgagtaacctcggcatcggccgcgacgccgccaagctctatatcgaccggtatttc
gcccgctaccccggcgtggcccgctacatggacgagacccgccaggtcgcgcacgaacgc
ggctatgtcgagacggtgttcggccgccgcctgtggctgcccgacatcaacggcggcaac
ggcccgcgccgccaggccgccgagcgcgccgccatcaatgcgcccatgcagggtaccgcc
gccgacctcatcaagctgtcgatgctggccgtgcaggactggctggaaggctcgcccaat
gccggcaagcccggcgtgccgatgcgcacgcgcctggtcatgcaggtgcacgacgaactg
gtgctggaagtcccgcaggacgaactggcgcgggtgcgcgagcgactgcccgagctgatg
tgcgacgtagcgtcgctgcgcgtgccgctggtggccgaggtgggtgtcggctcgaattgg
gaagaggcccattga
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