Ralstonia solanacearum PSI07: RPSI07_1362
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Entry
RPSI07_1362 CDS
T01273
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPSI07_1362 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsl03019
]
RPSI07_1362 (pnp)
03016 Transfer RNA biogenesis [BR:
rsl03016
]
RPSI07_1362 (pnp)
Enzymes [BR:
rsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RPSI07_1362 (pnp)
Messenger RNA biogenesis [BR:
rsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RPSI07_1362 (pnp)
Transfer RNA biogenesis [BR:
rsl03016
]
Prokaryotic type
tRNA degradation factors
RPSI07_1362 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
S1_2
KH_NusA_2nd
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
CBJ50723
LinkDB
All DBs
Position
1395223..1397391
Genome browser
AA seq
722 aa
AA seq
DB search
MFNKIVKEFQWGNHKVRMETGEIARQASGAVLLDMDDTVVLATVVGAKNAKPGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVVHVLSI
NPEVPADIPALVASSAALAVSGLPFNGPVGAARVGYKDGQYLLNPNRAQLAHSDLDLVVA
GTERAVLMVESEANQLSEDVMLGAVVYGHEQMQIAINAIHDLVREGGKPEWDWQAAPKNE
ALFAKVSELGLADLQAAYQLRQKSARSQKLKEVYKSVAEKLAAAGVEADGVEVDNILFEL
ESKIVRGQILDGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGTKS
DEQIIDALSGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKEDE
FAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVLTD
ILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILGKMQSA
MGHARTELSAHAPRMITVKINPEKIRDVIGKGGSTIQALTKETGCTIDIQEDGTITIAST
SSEGMAEAKRRIEGITAEAEVGKIYSGTVLKLLDFGAIVNILPGKDGLLHISEIANERVN
QVSDYVKEGQLVRVKLLSTDEKGRMRLSIKAAKAEEGDVPAAAPQAPGAGDAVSQQQQQE
QQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcgtcaaggaattccagtggggcaaccacaaggtgcgcatggagacg
ggcgagatcgcccgccaggccagcggcgccgtgctgctcgacatggacgacaccgtggtg
ctggccaccgtggtgggcgccaagaacgccaagccgggccaggatttcttcccgctgacc
gtcgactacatcgagaagacctacgccgccggcaagatcccgggcggcttcttcaagcgt
gaaggccgtccgtcggaaaacgagacgctgacctcgcgcctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtccaggtggtcgtgcacgtgctgtcgatc
aacccggaagtgccggccgacatcccggcgctggtggcctcctccgccgcgctggccgtg
tcgggcctgccgttcaacggcccggtgggcgctgcccgcgtgggttacaaggacggccag
tacctgctgaacccgaaccgcgcgcaactggcgcactcggacctggacctggtggtcgcg
ggcaccgagcgtgccgtgctgatggtcgaatcggaagccaaccagctgtcggaagacgtc
atgctgggcgccgtggtgtacggccatgagcagatgcagatcgccatcaatgccatccac
gacctggtgcgcgaaggcggcaagccggagtgggattggcaagctgccccgaagaacgaa
gcgctgttcgccaaggtgtccgaactgggcctggccgacctgcaagcggcttaccaactg
cgccagaagtcggcccgcagccagaagctgaaggaagtctacaagtcggttgccgagaag
ctggccgccgccggtgtggaagccgacggtgtcgaagtcgacaacattctgttcgagctc
gaatcgaagatcgtgcgcggccagatcctggacggcgaaccgcgtatcgacggccgcgac
acccgcacggtgcgcccgatcgagatccgctcctcggtgctgccgcgcgcgcacggctcg
gcgctgttcacccgcggcgagacgcaggcgctggtggtggccacgctcggcaccaagagc
gacgagcagatcatcgacgcgctgtccggcgagtaccgtgaccgcttcatgctccactac
aacatgccgccgttcgccaccggcgaaaccggccgcgtgggcagcccgaagcgccgcgaa
atcggccacggccgactggccaagcgtgcgctgatcccggtgctgccgaaggaagacgaa
ttcgcctacacgatccgcctggtgtcggagatcaccgagtcgaacggttcgtcgtcgatg
gcttccgtctgcggcggctgcctggcgctgatggatgccggcgtgccggtcaaggcgcac
gtggccggcgtggccatgggcctgatcctggaaggcaacaagttcgccgtgctgaccgac
atcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgacaac
ggtatcaccgcgctgcagatggacatcaaggtccagggcatcaccaaggaaatcatgcag
gtcgcgctggcccaagccaaggaaggccgcctgcatatcctgggcaagatgcagtccgcg
atgggccacgcacgcaccgagctgtcggcgcatgcgccgcgcatgatcaccgtcaagatc
aatccggagaagatccgcgacgtgatcggcaagggcggctcgaccatccaggcgctgacc
aaggaaaccggctgcacgatcgacatccaggaagacggcacgatcaccattgcgtcgacc
tcgtccgagggcatggccgaagccaagcgccgcatcgaaggcatcacggccgaagccgaa
gtgggcaagatctacagcggtaccgtgctcaagctgttggactttggcgcgatcgtcaac
atcctgccgggcaaggacggtctgctgcacatctcggagatcgccaacgagcgtgtcaac
caggtgtcggattacgtcaaggaaggccagctggtgcgcgtgaagctgctgagcaccgat
gaaaagggccgcatgcgtctgtcgatcaaggccgccaaggccgaggaaggcgatgtgccg
gccgccgcaccgcaggcaccgggtgccggcgacgccgtgtcgcagcaacagcagcaagag
cagcagtaa
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