Ralstonia solanacearum PSI07: RPSI07_2186
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Entry
RPSI07_2186 CDS
T01273
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03030
DNA replication
rsl03430
Mismatch repair
rsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPSI07_2186 (dnaX)
03430 Mismatch repair
RPSI07_2186 (dnaX)
03440 Homologous recombination
RPSI07_2186 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsl03032
]
RPSI07_2186 (dnaX)
03400 DNA repair and recombination proteins [BR:
rsl03400
]
RPSI07_2186 (dnaX)
Enzymes [BR:
rsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPSI07_2186 (dnaX)
DNA replication proteins [BR:
rsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPSI07_2186 (dnaX)
DNA repair and recombination proteins [BR:
rsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPSI07_2186 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_18
AAA_14
DUF3646
AAA_30
AAA_5
Herpes_Helicase
AAA_2
nSTAND3
TsaE
PIF1
AAA_19
AAA_28
Mg_chelatase
AAA_assoc_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
CBJ51551
LinkDB
All DBs
Position
complement(2289136..2291325)
Genome browser
AA seq
729 aa
AA seq
DB search
MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
SLNCVGTDGQGGITAQPCGVCRACTEIDTGRFVDYIEMDAASNRGVDEMAQLLDRAVYAP
TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVSHLDRILGEEGIAHEPNALRLLAAAAQGSMRDALSLTDQAIAYSAGEVSEV
AVRGMLGAIDQSYLVRLLDALADEHGAALIEIADEMAGRSLSFSGALQDLASLLQKIALA
QVVPAAVQDDWPEADDIRRLAERFDAQSVQLFYQFANLGRNELALAPDEYAGFTMTLLRM
LAFQPGQSSGDATPPSGGGQRAVPPANVPGGSSRPVVAAAAAGPVAQAAPAVRAELVVEA
PRATYQADPPAAAAPAAAPAAATQAQASAPSRRSPALEALAAARQASSRGARGGAAAVPA
ASTPAPVPAPAARPAMAGPRPNPATAPASPPRREPAAASAAADDFGPPPWEEMPGEFASP
SLDQIDAAFAGWEAASTTRPGAQASAARPAQTESPTAAPVPTKAAATEPVAAATPPDLSA
SGLTAFDGDWPTLAARLPLRGLAQQLAHQSELAAVEGATVRLRVPLPALTEAGVLERLEA
ALTEHFGTPVRVVCDIGAARATAAAIDAERRAQRQRDAEDAIAADPFVQALVRDFAATVV
PGSIQPHAH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtgctcgcccgcaagtggcgcccccgcgatttcaccacgctggtcggt
caggaacacgtggtgaaggcgctcacgcacgcgctcgaacagcagcgcctgcaccacgca
tacctgttcacgggcacgcgcggtgtcggcaagacgacgctgtcgcgcattctcgccaaa
tcgctcaattgcgtcggcacggacgggcagggcggcatcaccgcgcaaccgtgcggcgtg
tgccgcgcgtgcaccgagatcgataccgggcgcttcgtcgattacatcgagatggacgcc
gcctccaaccgcggtgtcgacgagatggcgcagctgctcgaccgcgcggtctacgcaccc
acggccggccgcttcaaggtctacatgatcgatgaagtgcacatgctgaccaaccacgcc
ttcaatgcgatgctgaagacgctggaggagccgcccgagcacgtcaagttcatcctcgcg
accaccgacccgcagaagatccccgtcacggtgctgtcgcgctgcctgcagttcaacctg
aagcagatgccgccggggcacatcgtgtcccacctggaccgcatcctcggcgaggagggc
atcgcgcacgagcccaacgcgctgcgcctgctggccgcggccgcgcaggggtcgatgcgc
gatgcgctgtcgctgaccgatcaggccatcgcgtacagcgccggcgaggtctccgaggtg
gccgtgcgcggcatgctgggcgcgatcgaccagagctatctggtgcgcctgctcgatgcg
ctcgccgacgagcacggcgcggcactgatcgagatcgccgacgagatggccgggcgcagc
ctgagcttctcgggggcgctgcaggacctcgcctcgctgctgcagaagatcgcgctggcg
caggtcgtgcccgccgcggtgcaggacgactggcccgaggccgacgacatccgccgcctg
gcggagcgcttcgatgcgcagtcggtgcaactgttctaccagttcgccaacctcggccgc
aacgagctggcactggcgcccgacgaatatgcgggcttcacgatgacgctgctgcgcatg
ctggcgttccagcccggccagtcgagcggcgatgcgacgccgccgtcggggggcggccag
cgtgccgtgccgccggccaatgtgccgggaggatcgtcgcggccggtcgtggcggcggcg
gccgctgggccggttgcccaggctgcgcccgctgtacgcgcggagctggtggtcgaggca
ccgcgtgcgacgtatcaagccgatccgccggccgccgccgcaccggccgcggcgcctgcc
gctgcgacgcaggcccaagccagcgcgccgtcccgccgctcgccggcgctggaagcgttg
gctgcggcgcgccaggcgtcgagtcggggcgcgcgcggcggtgctgctgcggtaccggcg
gcttccacgcccgcccccgtgccggcgccggctgcgcgtccagcgatggctggtccgcgc
ccgaatcctgccaccgcgcccgcgtcgccgccgcgccgtgaaccggccgccgcatccgcc
gctgccgacgactttggtccgccgccctgggaggagatgcccggcgagttcgcctcaccg
tctctcgatcagatcgacgccgcgtttgccggctgggaagcggcttcgacgacgcgtccg
ggcgcgcaggcgtccgccgcgcgtcctgcgcagaccgagtcgcccaccgcggcgccggtg
ccgaccaaggctgccgcaacggagcccgtggccgccgccacgccccctgatctgagcgcc
agcggcctgacggccttcgatggcgactggcccacgctcgcagcgcgcctgccgttgcgc
ggcctggcgcagcagctggcgcaccagagcgagctggccgccgtggagggcgcaacggtg
cgcttgcgcgtaccgctgccggcgctgaccgaggcgggcgtgctcgagcggctggaggcg
gcgctgacggagcacttcggcacgccggtccgcgtggtatgcgacatcggcgcagcccgg
gccacagccgctgccatcgatgccgagcggcgcgcccagcgccagcgtgacgccgaagac
gccatcgccgccgatccgttcgtgcaggcactggtccgggactttgccgcgacggtggtg
cccggttcgatccagccgcacgcgcactga
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