Ralstonia solanacearum PSI07: RPSI07_2261
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Entry
RPSI07_2261 CDS
T01273
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03410
Base excision repair
rsl03430
Mismatch repair
rsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPSI07_2261 (recJ)
03430 Mismatch repair
RPSI07_2261 (recJ)
03440 Homologous recombination
RPSI07_2261 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsl03400
]
RPSI07_2261 (recJ)
DNA repair and recombination proteins [BR:
rsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RPSI07_2261 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RPSI07_2261 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RPSI07_2261 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CBJ51625
LinkDB
All DBs
Position
2375524..2377221
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AA seq
565 aa
AA seq
DB search
MTRIAIRPHSAETASLLAGHGIHPVLARILAARGVARPSELSTELADLLAPAQLKGIDDA
ARYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGAQVGYIVPNRFEYGYGLSPEI
VALAAREKPDVLVTVDNGIADVAGVAAANALGIDVVVTDHHMPGAQLPEARVIVNPNQPG
CGFPSKHLAGVGVMFYVLLALRAELRNRGAFTLQNQPRLDALLDLVALGTVADVVRLDAN
NRVLVAQGLKRMRAGRMCAGIAALFRVSGREARRASTFDLGFGLGPRLNAAGRLADMSLG
IECLLTDDFDRAMAIAAELDGMNRERREIEAGMQQEAMAILSSTLVGMEGSGSHTIAVYN
ETWHQGVIGIVASRLKDKFHRPVITFAPGDDGVIKGSGRSIPGFHLRDALDAVHKRCPGL
IVKFGGHAMAAGLSLRADGFAPFVETFEAVGREWLNEALLSRVLETDGEADPECFTPQFV
ELLETHVWGQGFPAPSFCGEFDVLSQAVLKEKHLKLQLGRGKQRFDAIWFNHAEPLGASA
YVAYRLDNNTFNGITRVQMVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtatcgccatccgtccacattccgccgagaccgccagcctgctggccggccac
ggcatccatcctgtcctggcccgcatcctggccgcgcgcggtgtcgcccgacccagcgaa
ctgtcgaccgaactggccgacctgctggcgccagcccagctcaagggcatcgacgacgcg
gcgcgctacctagccgacgcgattgccgccggcaagcgcctgctgatcgtcgccgactac
gactgcgacggcgccaccgcctgcgcggtcggcgtgcgcgggctgcgcatgctgggcgcg
caggtcggctacatcgtgcccaaccgcttcgaatacggctacggcctgtcgcccgagatc
gtggccctggccgcgcgcgagaagccggacgtgctcgtcaccgtcgacaacggcatcgcc
gacgtggcgggcgtggcggcggccaacgcgctgggcatcgacgtcgtcgtcaccgatcac
cacatgccgggggcgcagttgcccgaggcgcgcgtgatcgtcaacccgaaccagccgggc
tgcggcttcccgagcaagcacctggccggcgttggcgtgatgttctacgtattgctggcg
ctgcgggccgagctgcgcaaccgcggggccttcacgctgcagaaccagccgcgcctcgat
gcgctgctcgatctggtggcgctcggcaccgtggccgacgtggtccggctcgatgccaac
aaccgggtgctggtggcgcagggcctcaagcgcatgcgcgcgggccggatgtgcgcgggc
atcgcggcgctgttccgcgtgtccgggcgcgaggcgcggcgcgcgtccaccttcgacctc
ggtttcggcctgggcccgcgcctgaatgccgccggccggctggccgacatgtcgctcggc
atcgaatgcctgctgaccgacgacttcgaccgcgccatggccatcgccgccgagctcgac
ggcatgaaccgcgagcgccgcgagatcgaagccggcatgcagcaggaggccatggcgatt
ctctcttccacgctggtcggcatggaaggcagcggcagccataccatcgcggtctacaac
gagacgtggcaccaaggcgtgatcggcatcgtcgcgtcgcggctcaaggacaagttccac
cgcccggtgatcaccttcgcgccgggcgacgacggcgtcatcaagggctcgggccgctcc
atccccggcttccacctgcgcgacgcgctggacgccgtgcacaagcgctgccccgggctg
atcgtcaagttcggcggccacgcgatggcggccgggctgtcgctgcgcgcggacggcttc
gccccgttcgtcgagaccttcgaggcggtaggccgcgaatggctgaacgaggccctgctc
tcgcgcgtgctcgaaaccgacggcgaagccgacccggagtgctttacaccgcagttcgtg
gaactgctcgaaacccacgtctggggacagggcttcccggcgccgagcttctgcggcgag
ttcgacgtgctgtcgcaggccgtgctgaaggaaaagcacctgaagctgcagctcgggcgc
ggcaagcagcgcttcgatgcgatctggttcaatcacgcggagccgctcggcgcgtcggcg
tatgtggcctaccggctggacaacaacaccttcaacggcatcacccgcgtgcaaatggtg
atcgagcatgcgcagtag
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