Ralstonia solanacearum PSI07: RPSI07_2820
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Entry
RPSI07_2820 CDS
T01273
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase hydrolase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPSI07_2820 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsl03019
]
RPSI07_2820 (rhlE)
Enzymes [BR:
rsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RPSI07_2820 (rhlE)
Messenger RNA biogenesis [BR:
rsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RPSI07_2820 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CBJ52183
LinkDB
All DBs
Position
complement(2945667..2947316)
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AA seq
549 aa
AA seq
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MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL
HRLSAVQPNKVHTSHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI
NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN
ILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKREL
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKAGT
LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG
LLRDIERLIKRELPRTVLPGFEPDPTIAPEPIPNGRNSARSPRQGGGRNQQPRQAAAGNA
APREPRAPREPRRESSGNGQGQAQGQGQGQGQGRNGGGRQRQAQGQRDGQAAPKPRGGKG
SGSGNGQSQARGQRQGNGQGSGQGSGQGGQRRASSTQAAQPAQVAKPAPKQPFNGLFAKA
AALLGGRKA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttccgaactcggcttgtcagacaagctggtacgtgccgttgccgaactcggc
tacgcagaacccaccccgattcaacgccaggccatccccgcgatcctcaagggcggtgac
ctgctcgccggcgcgcagaccggcaccggcaagaccgccggcttcacgctgccgctgctg
caccgcctgtccgccgtgcagcccaacaaggtgcatacgtcccacggcatgcgctatccc
atccgtgcgctggtgctcacgcccacgcgcgagctcgccgcgcaggtggaagagagcgtg
cgcgcctatggcaagtacctgccgctgaagtcgatggtgatgttcggcggcgtcggcatc
aatccgcagatcgatgcgctcaagcgcggcgtcgacatcgtcgtggccacgccgggccgt
ctgctggaccacgtcggccagcgcaccatcgacctgtcgcatatcgaactgctggtgctg
gacgaagccgaccgcatgctggacatgggcttcatccacgacatccgcaagatcctcaac
atcctgccgcccaagcgccagaacctgctgttctcggccacgttctcggacgacatccgc
gcgctggcagaccgcctgctggatcagcccgcgctgatcgaagttgcgcgccgcaacacc
accgccgagacggtcgaacagcgcatctacccggtcgaccgcgaacgcaagcgcgaactg
ctcgccaagctcgtgcgcgacaacgactggcaccaggtgctggtcttcacgcgcaccaag
cacggcgccaaccgcctggccgagcagctcacgcgcgacggcattccggcgctggccatc
catggcaacaagagccagtcggcgcgtacgcgggcgctgtcggagttcaaggccgggacg
ctgcgcgtgctggtcgccaccgacatcgccgcgcgcggcatcgacatcgaccagctgccg
cacgtggtcaacttcgacctgcccaacgtgccggaagactatgtgcaccgcatcggccgc
accggccgcgcgggcgcgcagggcgaggcgatctcgctggtgtgcgtggatgagcacggc
ctgctgcgcgacatcgagcgcctcatcaagcgcgagctgccgcgcaccgtcctgccgggt
ttcgagccggacccgaccatcgcgccggagccgattccgaatggccgcaacagcgcccgt
tcgccgcgccagggcggcggccgcaaccagcaaccgcgccaggcggctgccggcaacgcc
gcgccgcgcgagccccgcgcaccgcgcgagccgcgtcgagagtccagtggcaacggtcaa
gggcaagcgcaaggccagggtcagggtcagggccaaggtcgcaacggcggtggccgccag
cgtcaggcgcagggccagcgtgatggtcaggctgcaccgaagccgcgcggcggcaagggt
agtggtagcggcaacggccagtcgcaagcacgcggtcagcgtcagggcaatggccagggc
agtgggcagggcagtgggcagggcggtcagcgccgcgcttccagcacgcaagccgcgcaa
ccggcccaggtggcgaagcccgcgcccaagcagccgttcaacggcctgttcgccaaggct
gcggcgctgctcggcggccgcaaggcctga
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