Ralstonia solanacearum PSI07: RPSI07_3003
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Entry
RPSI07_3003 CDS
T01273
Name
(GenBank) conserved protein of unknown function, putative UPF0042 protein (ATP binding, nucleotide binding)
KO
K06958
RNase adapter protein RapZ
Organism
rsl
Ralstonia solanacearum PSI07
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsl03019
]
RPSI07_3003
Messenger RNA biogenesis [BR:
rsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RPSI07_3003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_28
AAA_16
CoaE
FtsK_SpoIIIE
AAA_22
T2SSE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CBJ52359
LinkDB
All DBs
Position
3138567..3139457
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AA seq
296 aa
AA seq
DB search
MRIILITGMSGSGKSVALNVLEDAGYYCVDNLPAQFIPELARYLADQGYTHLGIATDIRS
RESLRKVPETITQLRKEHDVRMLFLTASTNALVQRYSETRRRHPLSIRNGRPDTGSPHSA
AKGPDTSLIEAIEMERELLSPLADPAHRIDTSTLRTNALRAYIKEFISDEPHDITLMFES
FGFKHGVPTDADLVFDVRSLPNPYYDTQLRPLTGRDQPVIDFLQSQPMVLAMAEDIRAYV
EKWLPSFIADNRSYLTVAIGCTGGQHRSVYIAERLATYFRAHGNVLVRHRELAVDA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcattctcatcaccggtatgtcgggttcggggaagtcggtcgccctgaacgtg
ctcgaagacgcaggctactactgcgtggataacctgcccgcgcagttcattccggaactg
gcgcgctatttggcggaccagggctacacgcacctgggcatcgccaccgacatccgcagc
cgcgaatcgctgcgcaaggtgccggagacgatcacccaactgcgcaaggaacacgatgtc
cgcatgctgttcctgacggccagcacgaatgcgctggtgcagcgctactcggagacgcgc
cggcgccatccgctgtcgatccgcaacggccggcccgacacgggcagtccgcacagcgca
gccaagggtcccgacacctcgctcatcgaagccatcgaaatggagcgggagctgctgagc
ccgctcgccgacccggcacaccgcatcgacaccagcaccctgcgcaccaacgccctgcgc
gcgtacatcaaggaattcatcagcgacgagccgcacgacatcaccctgatgttcgaatcg
ttcggcttcaagcacggcgtgccgacggacgccgacctcgtcttcgacgtgcgctcgctg
cccaacccctactacgatacgcagctgcggccgctgaccggtcgcgaccagcccgtcatc
gacttcctgcaaagccagccgatggtgctggcgatggccgaagacatccgcgcctatgtc
gaaaagtggctgccaagtttcatcgccgacaaccgcagctacctgaccgtcgccatcggc
tgcacgggggggcagcaccgttccgtctatatcgcggagcggctcgccacctacttccgc
gcgcatggtaatgtgttggtccgccaccgcgaacttgcggtagacgcgtaa
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