Ralstonia solanacearum PSI07: RPSI07_3007
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Entry
RPSI07_3007 CDS
T01273
Symbol
mutM
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPSI07_3007 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsl03400
]
RPSI07_3007 (mutM)
Enzymes [BR:
rsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RPSI07_3007 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RPSI07_3007 (mutM)
DNA repair and recombination proteins [BR:
rsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPSI07_3007 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
CBJ52363
LinkDB
All DBs
Position
complement(3143670..3144536)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEVTRLGLVPHLTGRRIVRAVVRHHGLRWPVDPALPELLGGRTVTRVLRRGKYL
LIECVPDAAREPLAVAGWLLVHLGMTGTLRVLETPVAPGTHDHLDIELADAAGRPITLRY
RDPRRFGAVLWHAGDEAGLSAHPLLRNLGIEPFDARFDGDWMYARTRGRSAAIKTVLLAG
DIVVGVGNIYCSESLFRAGIRPTTAAGRISRPRYAALAEAIRATLADAIARGGSTLRDFV
GSDGQSGYFQLDALVYDRAGLPCRVCGTPIRQIVQGQRSTFYCPACQR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaggtcgaggtcacccggctgggactcgtcccgcacctgaccggt
cggcgaattgtccgtgccgtggtacggcatcacggcctgcgctggccggtcgatccggcg
ctgcccgagctgctgggcgggcgtacggtcacgcgtgtgctgcgccggggcaagtatctg
ctgatcgaatgcgtgcccgacgctgcccgcgagccgctggcggtggccggctggctgctg
gtccacctaggcatgacgggcaccttgcgtgtgctggagacacccgtggcgcccggcacc
cacgaccatctcgatatcgaactagcggacgcggccggtcggcccatcacattgcgctac
cgcgatccgcgccgctttggtgccgtgctatggcacgccggggacgaggccgggctgtcg
gcgcatccgttgctgcgcaacctcggcatcgagcctttcgacgcgcgcttcgacggcgac
tggatgtacgcccgcacacgcggccgcagcgctgccatcaagaccgtgctgctggccggc
gacatcgtggtcggcgtcggcaatatctattgttcggaaagcctgttccgcgcgggcatc
cggcccaccacggcggccgggcgcatcagccggccgcgctatgcggcgctggcggaggcc
atccgcgccacgctggcggatgccattgcccgcggcggcagcacgctgcgcgacttcgtc
ggctcggacgggcagagcggctattttcagctggatgcgctcgtctatgaccgagcaggc
ctgccgtgccgtgtgtgcggtacgccgatccgccagatcgtgcagggccagcgttcgact
ttctattgtcccgcctgtcagcgctga
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