Ralstonia solanacearum PSI07: RPSI07_3186
Help
Entry
RPSI07_3186 CDS
T01273
Name
(GenBank) conserved protein of unknown function
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
rsl
Ralstonia solanacearum PSI07
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsl03016
]
RPSI07_3186
Enzymes [BR:
rsl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
RPSI07_3186
Transfer RNA biogenesis [BR:
rsl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
RPSI07_3186
Prokaryotic type
tRNA splicing ligases
RPSI07_3186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
CBJ52538
LinkDB
All DBs
Position
complement(3316215..3317435)
Genome browser
AA seq
406 aa
AA seq
DB search
MSNTNYNTLHVDHGADIKLWTHGVPVEDDARKQLMNTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTRGAIIPAAVGVDIGCGMMAARTTLTAADLPDNLHGLRSAIEAAVPHGRTPGAR
DKGAWSTPPATVDAMWAELVEGFDRITDKYPKLKKTNNHKHLGTLGTGNHFIEVCLDEEN
RVWFMLHSGSRGVGNAIGNHFIELAQADMRQHIANLPDRDLAYFEEGSEHFDDYVEAVGW
AQDYARRNRATMMQNVIAAARKVIAKPFAADVEAVNCHHNYVQRETHFGHEVLVTRKGAV
SAQKGQLGIIPGSMGAKSFIVRGLGNEEAFCSCSHGAGRTMSRTQAKKRYTVDDQVRATA
HVECRKDADVIDEIPMAYKDIDAVMAAQADLVEIVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaccaactacaacaccctccacgtcgaccacggcgccgacatcaagctgtgg
acccacggcgtgccggtcgaagacgatgcccgcaagcagctgatgaacacggccaagatg
ccgttcatcttcaagcacctggcagtgatgccggacgtgcacctgggcaaggggtcgacc
atcggcagcgtgattccgacgcggggggcgatcatcccggcggcggtgggcgtcgatatc
ggctgcggcatgatggccgcgcgcaccacgctcacggcggccgacctgccggacaacctg
cacggcctgcgcagcgccattgaggcggcggtgccgcacgggcgtacgccgggggcacgc
gacaagggcgcgtggagcacgccgccggccacggtcgatgcgatgtgggcggagctggtc
gagggcttcgatcggatcaccgacaagtatccgaagcttaagaaaacgaacaaccacaag
cacctcggcacgctcggtaccggcaaccacttcatcgaggtctgcctggatgaagagaac
cgcgtctggttcatgctgcactccggttcgcgcggcgtgggcaatgcgatcggcaaccac
ttcattgaactggcgcaagccgatatgcggcagcacatcgccaacctgccggaccgcgac
ctggcgtatttcgaggaaggcagcgagcacttcgacgactacgtggaggcggtgggctgg
gcgcaggactacgcgcgccgcaaccgcgccaccatgatgcagaacgtcatcgcggccgcg
cgcaaggtcatcgccaagccgttcgcggccgacgtggaagcggtgaactgccaccacaac
tatgtgcagcgcgagacccacttcggccacgaggtgctggtgacgcgcaagggcgcggtg
tcggcgcagaaggggcagctcggcatcatcccgggttcgatgggcgcgaagagcttcatc
gtgcgcgggctgggcaacgaagaggcgttctgctcgtgcagccacggcgcgggccgcacc
atgagccgcacgcaggccaagaagcgctacacggtggatgaccaggtccgcgccaccgcg
cacgtggagtgccgcaaggatgccgacgtcatcgacgagatcccgatggcctacaaggac
atcgacgccgtgatggccgcgcaggcggacctggtggagatcgtccatacgctgcggcag
gtggtgtgcgtgaaggggtag
DBGET
integrated database retrieval system
