Entry |
|
Symbol |
dapF
|
Name |
(GenBank) diaminopimelate epimerase
|
KO |
|
Organism |
rsl Ralstonia solanacearum PSI07
|
Pathway |
rsl01110 | Biosynthesis of secondary metabolites |
rsl01120 | Microbial metabolism in diverse environments |
|
Module |
rsl_M00016 | Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine |
|
Brite |
KEGG Orthology (KO) [BR:rsl00001]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPSI07_3244 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPSI07_3244 (dapF)
Enzymes [BR:rsl01000]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RPSI07_3244 (dapF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3372874..3373731)
|
AA seq |
285 aa
MHGAGNDFVVLDGIETPIDFTPEQWRAIADRHFGVGADQLLLVERSTRPDVDFRYRIFNH
DGGEVEHCGNGARCFVKFVTDRGLTDKRTIRVEVMHGIATLTMQPDGQVTVDMGAPVFEA
ARLPFVPDGLPTRVEGADTQHALQINGRTEWLSTVSMGNPHAVQVVDDAEAFPVLEDGPL
IESHAVFPRRVNAGFMEIVDRHAIRLRVYERGAGETLACGTGACAAVVAGIRRGLLDSPV
KVATHGGDLTIAWAGEGEPVLMTGPATTVFEGTLDLDALKQTAAH |
NT seq |
858 nt +upstreamnt +downstreamnt
atgcacggcgccggcaacgacttcgtcgtgctcgacggcatcgagaccccgatcgacttc
acccccgaacagtggcgcgccatcgccgaccgccacttcggcgtgggcgccgaccagctg
ctgctggtggagcgctccacccgccccgacgtcgatttccgctaccgcatcttcaaccac
gacggcggcgaggtggagcactgcggcaatggcgcgcgctgcttcgtcaagttcgtcacc
gaccgcggcctgacggacaagcgcaccatccgcgtggaagtgatgcatggcatcgccacg
ctgacgatgcagcccgacggccaggtgacggtcgacatgggcgccccggtgttcgaggcc
gcgcgcctgcccttcgtgcccgacggcctgcccacccgcgtggaaggcgccgacacgcag
cacgccctgcagatcaacggccgtaccgaatggctatccaccgtgtcgatgggcaacccg
cacgcggtgcaggtggtcgatgacgcggaagccttcccggtgctggaagacggcccgctg
atcgaatcgcacgctgtgttcccgaggcgcgtgaatgccggcttcatggagatcgtcgat
cgccacgccatccgcctgcgcgtgtacgagcgcggtgcgggcgagacgcttgcctgtggg
accggtgcctgcgcggcggtggtggccggtatccgtcgcggcctgctggattcgcccgtc
aaggtggccacgcacggcggcgacctgaccatcgcctgggccggcgagggcgagccggtg
ttgatgaccggcccggccacgaccgtgttcgaaggcacgctggacctcgatgcgctgaag
cagaccgccgcgcactga |