Ralstonia solanacearum PSI07: RPSI07_3313
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Entry
RPSI07_3313 CDS
T01273
Name
(GenBank) putative long-chain-fatty-acid--coa ligase protein (fadD2)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rsl
Ralstonia solanacearum PSI07
Pathway
rsl00061
Fatty acid biosynthesis
rsl00071
Fatty acid degradation
rsl01100
Metabolic pathways
rsl01212
Fatty acid metabolism
rsl02024
Quorum sensing
rsl04146
Peroxisome
Module
rsl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPSI07_3313
00071 Fatty acid degradation
RPSI07_3313
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPSI07_3313
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPSI07_3313
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rsl01004
]
RPSI07_3313
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsl04147
]
RPSI07_3313
Enzymes [BR:
rsl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPSI07_3313
Lipid biosynthesis proteins [BR:
rsl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPSI07_3313
Exosome [BR:
rsl04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPSI07_3313
Exosomal proteins of breast cancer cells
RPSI07_3313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CBJ52662
LinkDB
All DBs
Position
3445077..3446768
Genome browser
AA seq
563 aa
AA seq
DB search
MTAFNREPVDYLAGEMPLHRYCTHHAAQTPERIALLWYGRTICWRELDQLSTRLAVQFRR
LGVARGERVALFLQNCPQAILAHLAAAKLGAIAVPCLPLSRQHELRDQLADCGAKVLVAA
ADLMPTVEAARPGTSVATVITTRYADLQPAQPACRKALAVPPELIAADIASVPAGRGQAG
SGQFDLMQLLAEPVDVAERDAVAAIQVDLDEVALMIYTSGTTGRPKGAMLTHRNALYKTA
VTVQTSGIQAADVLLAVAPLSHIAGMLMGMNLMLYAGAPTILLYRFDPLAVLQAIDRYRV
TWWYSMTSMNLAVMAHPEAGQYRMASLVNNPCTSFGVPLTEAIADQWRAFAGPQCRVYEA
AYGLSETHTCDAVTPPDAPRWGWHGKIVPQTEVRIIDPHTGAELPPGRSGEITIRSPGVF
RGYWRREEATRATMQDGFLRTGDIGQVSPDGYLQWQGRLKELIKVSGYSVFPEDVEALLS
RHPAIRQVAVTPMPDPDKGDVVCAHVVRVSDTTLTEAELIAWSRENMAPYKVPRRVKFHD
ALPATATGKVLRRLLREEAAVAA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctttaaccgcgaaccggtcgactacctcgcgggcgaaatgccgctgcaccgc
tattgcacgcatcacgccgcgcagacccccgagcgcatcgccctgctgtggtatggccgc
acgatctgctggcgcgagctcgaccagctctcgacgcggctggccgtgcagttccggcgg
ctcggcgtggcgcggggggagcgtgtcgcgctgttcctgcagaactgtccgcaggccatc
ctggcgcacctggccgccgccaagctgggcgccatcgcggtgccatgcctgccgctgtcg
cgccagcatgagctgcgcgaccagctggccgattgcggtgcgaaggtcctggtcgccgcc
gccgacctgatgcccaccgttgaagccgcgcggccgggcacctcggtcgccaccgtcatc
accacgcgctatgccgatctgcagccggcgcagcccgcctgccgcaaggcgctggcggta
ccgccggagctgattgccgccgatatcgcctcggtgccggcgggccggggccaggccggc
agcggccagttcgacctcatgcagttgctggccgagccggtggacgtggccgagcgcgat
gccgtcgccgccatccaggtcgacctggatgaagtcgcgctgatgatctatacgtccggc
accaccgggcgccccaagggggcgatgctgacccaccgcaacgcgctgtacaagaccgcc
gtgaccgtgcagacgagcggcatccaggccgccgacgtgctgctggcggtggcgccgctg
tcgcacatcgccggcatgctgatgggcatgaacctgatgctgtacgcgggcgcgccgacc
atcctgctgtatcgcttcgacccgctggccgtgctgcaggcgatcgaccgctaccgcgtc
acctggtggtacagcatgacgtcgatgaacctggcggtgatggcgcatcccgaggccggg
caataccgcatggcctcgctggtgaataacccgtgtaccagtttcggcgtgccgctgacc
gaggcgatcgccgatcaatggcgcgccttcgcggggccgcaatgccgcgtctacgaagcg
gcctacggcctgtcggagacccatacctgcgacgccgtcacaccgcccgatgcaccccgc
tggggctggcacggcaagatcgtgccgcagaccgaggtacgcatcatcgatccgcacacc
ggcgccgaactgccgccgggccggtcgggcgaaatcacgattcgcagcccgggcgtgttc
cgcggctactggcggcgcgaggaagccacgcgggccacgatgcaggacggcttcctgcgc
accggcgacatcggccaggtgtcgcccgatggctacctgcaatggcagggccgcctcaag
gaattgatcaaggtgtcgggctacagcgtattcccggaagacgtggaggcactgctgtcg
cgccacccggcaatccggcaggtggccgtgacgccgatgccggacccggataagggcgac
gtggtctgcgcccacgtcgtgcgcgtgagcgacacgacgctcaccgaagccgagctgatc
gcctggtcgcgcgaaaacatggcaccgtacaaggtgccgcgccgggtgaagttccacgac
gcgctgccggccacggccaccggcaaagtactgcggcggttgttgcgggaagaggcggcg
gtggctgcctga
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