Ralstonia solanacearum PSI07: RPSI07_mp0088
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Entry
RPSI07_mp0088 CDS
T01273
Name
(GenBank) putative propionate catabolism operon regulatory transcription regulator (prpR)
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
rsl
Ralstonia solanacearum PSI07
Brite
KEGG Orthology (KO) [BR:
rsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsl03000
]
RPSI07_mp0088
Transcription factors [BR:
rsl03000
]
Prokaryotic type
Helix-turn-helix
Other families
RPSI07_mp0088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS
PAS_8
PAS_4
AAA_2
AAA_7
Oxidored_nitro
AAA_16
HTH_Tnp_ISL3
PAS_7
Diguanyl_cycl_sensor
AAA
UbiD_N
TIP49
IstB_IS21
HTH_23
DUF815
AAA_3
DUF6262
Motif
Other DBs
NCBI-ProteinID:
CBJ34449
LinkDB
All DBs
Position
mpPSI07:95736..97673
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AA seq
645 aa
AA seq
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MSTALHLTPRPRIWACGISRLSDLFLDIAAEYNDRAELRVITRGFEDIVREIETAGAERP
DVVVAGGSNGAYLKPRLSLPVVVINPTGFDVMHALARARREAESVALVTHGDTPDEVRRF
VAAYGMDVVFASYASRQDAESCVLDLRDRGVGAVVGPGLVTDLAAQAGMNAVFLYSRDSV
RAAFDTALEVVQATRRETLRRQRLDNLLQHLRDGVVALDARGRIEAINQRLATALGIDAR
QAAGQPLLDIAPNLLGLLPDTDGDTLGTVRGVSYVIHRGPLASTGAADGTVFTFQESRAV
ERLDRTLRSGQRAQQFTARYRLDDLIGTSAPMERVRTLVRRYARSDATVLVLGESGTGKE
MVAQGMHQLSARRDFPFVAINCGAFPEALLESELFGYEEGAFTGARKGGKTGLIEAAHRG
TLFLDEIGEMPLPLQSRLLRVLQEREVVRLGSTEPTRVDIRVVAATHCALTDAVAAGTFR
ADLYYRLNILSIALPPLRERPGDVMPLAAELLVQAARREPRLLLRIPDTEVAARVFAGIG
EPLRGYAWPGNVRELQSVIERIAVELADEEEAGAITREALRAIAPEVFASAPRDKTAALT
LRERSRGVEAEEIRAALAAHGGDRDAVCAALGISKTTLWRRLNVS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccctccacctcacgccacgtccccgcatctgggcctgcggcatcagccgc
ctgagcgacctgtttctcgacatcgctgccgaatacaacgaccgcgccgagctgcgcgtc
atcacacgcggcttcgaagacatcgtccgcgagatcgaaaccgccggcgcggagcgcccc
gacgtggtggtcgcgggcggctccaacggtgcgtatctcaagccgcgcctgtcgctgccc
gtggtcgtcatcaatccgaccggcttcgacgtgatgcacgcgctggcccgcgcgcggcgc
gaggcggaatcggtggcgctggtcacccacggcgacacgcccgacgaggtgcgccgcttc
gtcgccgcctacggcatggacgtggtgttcgcctcgtatgcgtccaggcaggatgccgag
agctgcgtgctggacctgcgcgaccgcggcgtgggcgcggtggtcggccccggcctggtg
acggacctggccgcgcaggccggcatgaacgcggtgttcctgtattcgcgcgactccgtg
cgcgccgccttcgacaccgcgctggaagtcgtgcaggccacccgccgcgaaacgctgcgc
cgccagcgcctggacaacctgctgcagcacctgcgcgacggcgtggtcgcgctcgacgcc
cggggccgcatcgaggccatcaaccagcggctggccaccgcgctcggcatcgacgccagg
caggccgccgggcagccgctgctcgacatcgcgcccaacctgctgggcctgctgcccgac
accgacggcgacacgctcggcaccgtgcgcggcgtgagctacgtcatccaccgtggcccc
ctggccagcaccggcgcggccgacggcaccgtgttcaccttccaggaatcgcgcgcggtg
gagcggctcgaccgcacgctgcgctccggccagcgcgcccagcagttcaccgcccgctac
cggctcgacgacctgatcggcacgtccgcgccgatggagcgcgtgcgcacgctggtgcgg
cgctatgccaggtccgatgcgaccgtgctggtgttgggcgagtccggcacgggcaaggag
atggtggcgcagggcatgcatcagctgagcgcgcggcgcgactttccgttcgtcgccatc
aactgcggcgccttcccggaggcgctgctggagagcgagctgttcggctacgaagagggc
gctttcacgggggcacgcaagggcggcaagaccgggctgatcgaagccgcgcatcgcggc
acgctgttcctggatgaaatcggcgagatgccgctgccgctgcagagccgtctgctgcgg
gtgctgcaggagcgggaggtggtgcggctggggtccaccgagccgacgcgggtggacatc
cgcgtcgtcgccgccacgcactgcgcgctgacggatgcggtggcggccggcaccttccgc
gccgacctgtactaccgcctcaacatcctcagcatcgcgctgccgccgctgcgcgaacgg
cccggcgatgtgatgccgctggcggctgaactgctggtgcaggctgcgcgtcgcgagccg
cgcttgctcttgcgcatccctgacacagaggtcgccgcgcgcgtcttcgccggcatcggc
gagccgctgcggggctatgcgtggcccggcaatgtgcgggagttgcagagcgtgatcgaa
cggatcgccgtggagctggcggacgaggaggaggccggcgccatcacgcgcgaggcgctg
cgggcgattgcgccggaggtgtttgcgtcagccccgcgcgacaagacggccgcgttgacg
ttgcgggagcgcagccggggcgtggaggccgaagagatacgcgccgcgctggcggcgcat
gggggcgatcgagacgcggtgtgtgccgcgctggggatcagcaagacgacgttgtggcgg
aggttgaacgtgagctag
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