Ralstonia solanacearum CMR15: CMR15_10003
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Entry
CMR15_10003 CDS
T02725
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B (type II topoisomerase)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rsm
Ralstonia solanacearum CMR15
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsm03032
]
CMR15_10003 (gyrB)
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_10003 (gyrB)
Enzymes [BR:
rsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CMR15_10003 (gyrB)
DNA replication proteins [BR:
rsm03032
]
Prokaryotic type
DNA Topoisomerases
CMR15_10003 (gyrB)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CMR15_10003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CBJ36218
LinkDB
All DBs
Position
3577..6105
Genome browser
AA seq
842 aa
AA seq
DB search
MTEQQKPQSTPAESSSYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DEALAGHCTEIHVTIHTDNSISVIDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKF
DQNSYKVSGGLHGVGVSCVNGLSKWLKLTVRRDGKVHNMEFARGIPQNRLLEQAEAPDGK
MVEVSPLRMSGTTDKRGTEVHFLADEEIFTNVEYHYEILSKRIRELSFLNNGVHIKLTDQ
RTGKEENFAFSGGVKGFVEYINKNKSVLHPTIFYATGEKDGVGVEVSMQWNDGFNEQVLC
FTNNIPQRDGGTHLTGLRAAMTRVINKYIADNEIAKKAKVETSGDDMREGLTCVLSVKVP
EPKFSSQTKDKLVSSEVRLPVEEIVSKVLNDFLLETPNDAKIICGKIVEAARAREAARKA
REMTRRKGVLDGMGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRKFQAILPLKG
KILNVERARFDKMLSSQEVLTLITAMGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRT
LLLTFFYRQMPEIIERGHVYIAQPPLYKIKHGKEERYIKDDNEMAAYLMRQALDTAILVR
ADGTEIASDALAELARQYQFSRAVIERLSRVIDADALRAIAEGVALDLSSEAAADASAKA
LKARLLEMQGNASNANGGATADAFMQYDEKHEKYRVMVVRRQHGNQRLSHIDADFVAGAD
YATLSQTAQTFQGLIGEGAKVRRGTGDKQREQAVTDFHAAITWLLAEAERGISRQRYKGL
GEMNPEQLWETTMDVTQRRLLKVQIEDAIAADQIFTTLMGDDVEPRRNFIETNALVARNI
DV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagcagaaaccgcaatccacacccgccgaaagcagcagctacggcgccgcc
tcgatccagatcctggaaggcctggaggcggtgcgcaagcggccgggcatgtacatcggc
gatacgtcggatggcaccggcctgcaccacctcgtgttcgaggtgctggacaactccatc
gacgaggcgctggcggggcattgcaccgagatccacgtcaccatccacaccgacaactcg
atctccgtgatcgacaacggccggggcatcccgaccggcatcaagttcgatgacaagcac
gagccgaagcgcagcgcggccgagatcgtcatgaccgagctgcacgccggcggcaagttc
gaccagaacagctacaaggtctcgggcggcctgcacggcgtgggcgtgtcgtgcgtgaac
ggcctgtcgaaatggctgaagctgacggtgcgccgcgacggcaaagtgcacaacatggag
ttcgcgcgcggcattccgcagaaccgtctgctggagcaggccgaggcgccggacggcaag
atggtcgaggtctcgccgctgcgcatgtccggcaccaccgacaagcgcggcaccgaagtg
cacttcctggccgacgaagagatcttcaccaacgtcgagtaccactacgagatcctctcc
aagcgcatccgcgagctctcgttcctgaacaacggcgtgcacatcaagctgaccgaccag
cgcaccggcaaggaagaaaacttcgccttctcgggcggcgtgaagggcttcgtcgagtac
atcaacaagaacaagtcggtgctgcacccgaccatcttctacgccacgggcgagaaggac
ggcgtgggcgtggaagtgtcgatgcagtggaacgacggcttcaacgagcaggtgctctgc
ttcaccaacaacatcccgcagcgcgacggcggcacccacctgaccggcctgcgcgcggcg
atgacgcgcgtcatcaacaagtacatcgccgacaacgagatcgccaagaaagccaaggtg
gaaacctcgggcgacgacatgcgcgaaggcctgacctgcgtgctgtcggtgaaggtgccg
gagccgaagttcagctcgcagaccaaggacaagctggtctcgtcggaagtgcggctgccg
gtggaagagatcgtctccaaggtgctgaacgacttcctgctggagacgcccaacgacgcc
aagatcatctgcggcaagatcgtcgaagccgcgcgtgcccgcgaagccgcgcgcaaggcc
cgcgagatgacgcgccgcaagggcgtgctcgacggcatgggcctgcccggcaagctggcc
gactgccaggagaaagaccctgcactgtccgaactgttcatcgtcgagggtgactccgca
ggcggctctgccaagcagggccgcgaccgcaagttccaggcgatcctgccgctcaagggc
aagatcctgaacgtggagcgcgcgcgcttcgacaagatgctctccagccaggaagtgctc
acgctcatcaccgccatgggcaccggcatcggcaaggacgactacaacctcgacaagctg
cgctaccaccgcatcatcatcatgaccgacgcggacgtggacggctcgcacatccgcacg
ctgctgctgacgttcttctaccgccagatgcccgagatcatcgagcgcggccacgtgtac
atcgcccagccgccgctgtacaagatcaagcacggcaaggaagagcgctacatcaaggac
gacaacgagatggccgcgtacctgatgcgccaggccctcgacaccgccatcctggtgcgc
gcggacggcaccgagatcgccagcgacgcgctggccgagctggcccgccagtaccagttc
tcgcgcgccgtgatcgaacgcctgtcgcgcgtgatcgacgccgatgcgctgcgcgccatt
gccgaaggcgtggcgctggatctctccagcgaagccgccgccgacgccagcgccaaggcg
ctcaaggcccgcctgctggaaatgcagggcaacgccagcaacgccaacggcggcgccacg
gcagatgcgttcatgcagtacgacgagaagcacgagaagtaccgcgtgatggtcgtgcgg
cgtcagcatggcaaccagcgtctgtcacatatcgacgccgacttcgtggccggcgcagac
tacgccacgctgtcgcagactgcgcagaccttccaagggttgatcggggagggtgccaag
gtgcggcgtgggactggtgataagcaacgcgagcaggctgttacggatttccatgccgcg
attacctggctgctggcggaggctgagcggggcatcagccggcagcgctataaggggctg
ggtgaaatgaatcctgagcagctctgggaaaccaccatggatgtcacccagcgccgcctg
ctcaaggtgcagattgaggatgctattgcggcggatcagatctttacgacgctgatgggc
gacgacgttgaaccgcggcggaactttattgagactaatgcgttggtggcgcggaatatt
gatgtttga
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