Ralstonia solanacearum CMR15: CMR15_10164
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Entry
CMR15_10164 CDS
T02725
Symbol
priA
Name
(GenBank) Primosome factor n' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CMR15_10164 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_10164 (priA)
Enzymes [BR:
rsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMR15_10164 (priA)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CMR15_10164 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
ADDB_N
Bac_DnaA
Zn_ribbon_6
CDC48_2
HypA
DUF5817
Motif
Other DBs
NCBI-ProteinID:
CBJ36378
LinkDB
All DBs
Position
176346..178577
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AA seq
743 aa
AA seq
DB search
MIDTPLDAVFDYRCAQPVVPGQLVVVPFGSRRVVALVVETTGTTEVPEDRLRDVERVLDW
LPPLDTEWRALAEFAAGYYHRALGEVTLPALPPLWRTPGSWDSLARHATETVYVMREPAR
AALLDSIPRRAAGVMRLAEALTGDGELSTSAAVALHGQATAKLRDWAAAGWVGAELRPKP
LLPVPRDLPPASVAPALNAEQATAVDAIAQAGAGGGFAPFLLYGVTGSGKTEVYLHAIAD
ALARDPAAQVLMLVPEINLTPQLEARIAARFPGVPLAALHSGLAEQPRALNWLAAHRGEA
RIVLGTRLAMLASLPHLALILVDEEHDTSYKQQEGLRYSARDLALWRAKQRGIPIVLGSA
TPSLETWWRAEQGTTARLVLSQRAQADAVLPRVSLIDLTLERRAGREIRDGLSRPLLDAV
AGRLARGEQSLLFLNRRGYAPVLACDACGWLSGCPRCSAYLVLHKPEHRLRCHHCGYESR
IPHHCPDCGNVDIAPLGRGTQRIEETLGALFPQARVARIDADSTRRKGSAEALFDTVHEG
AVDILIGTQMVAKGHDFQRVTLVGVVAPDASLFSHDFRAGEHLFASLMQVAGRAGRAGLA
GEVLIQTRYPDAPALLALVRHDYAGFARQLLRERKQACLPPFAYQALLTAEHRELARALE
FLGAARAAGQAVAEAQGLPVQLHDPVPMTMVRLANRERAQLLLESASRAALQRLLAAWTD
GFGEIGRTVKGVRWQLEIDPLRI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatacgccgctggatgccgtattcgactatcgttgcgcgcagccggtcgtgccg
ggccagctggtggtggtgccgttcggtagccgccgcgtggtggcgctggtggtggagacc
accggcaccaccgaggtgccggaagaccgcctgcgcgacgtcgagcgcgtgctcgactgg
ctgccgccgctggataccgaatggcgcgcgctggccgaattcgccgccggctactaccac
cgggcgctgggtgaagtgacgctgccggcactgccgccgctgtggcgcacgcccggcagc
tgggacagcctggcccgccacgccaccgaaaccgtctacgtgatgcgcgagccggcgcgc
gccgccttgctcgacagcatcccccggcgggcagccggggtgatgcgcctggccgaagcg
ctgaccggcgacggcgaactgtccaccagcgccgccgtcgcgctgcacggccaggcgacg
gcgaagctgcgcgattgggccgcggcgggctgggtcggggcagagctgcgtcccaagccg
ctgctgccggtgccgcgcgacctgccgccggcgtccgttgcgccggcgctcaatgccgag
caggccacggccgtcgacgccatcgcgcaggccggggcgggcggcggtttcgcgccgttc
ctgctgtatggggtcacaggtagcggcaagactgaggtctacctgcacgccatcgccgat
gccctcgcgcgcgatccggccgcgcaggtgttgatgctggtgcccgagatcaacctgacg
ccgcagctggaggcgcgcattgcggcgcgcttccccggcgtgccgctggccgcgctgcac
agcggcctggccgagcagccgcgcgcgctgaactggctggcggcgcatcgcggcgaggcg
cgcatcgtgctcggcacgcggctggcgatgctggcctcgctgccgcacctcgcgctgatc
ctcgtcgacgaggagcacgacacgtcctacaagcagcaggagggcctgcgttattccgcg
cgcgatctggcgctgtggcgggccaagcagcgcggcatcccgatcgtgctcgggtcggcc
acgccgtcgctggagacctggtggcgcgccgagcagggcaccaccgcgcgcctggtgctg
tcgcagcgcgcgcaggccgatgcggtgctgccgcgcgtctcgctgatcgacctgacgctg
gagcgccgcgcgggccgggagatccgcgacgggctgtcccggccgctgctcgatgccgtt
gccgggcgcctggcgcgcggcgagcagagcctgctgttcctcaatcgccgcggctacgcg
ccggtgctggcgtgcgatgcatgcggctggctgtcgggctgcccgcgctgctcggcgtac
ctggtgctgcacaagccggagcaccggctgcgctgccaccattgcggctacgaatcgcgc
atcccgcaccattgcccggactgtggcaacgtcgacatcgcgccgctcgggcgcggcacg
cagcgcatcgaggaaaccctcggcgcgctgtttccgcaggcacgcgtggcgcgcatcgac
gccgactccacccgccgcaagggcagcgccgaggcgctgttcgacaccgtgcacgaaggg
gccgtcgatatcctgatcggcacgcagatggtcgccaaggggcacgacttccagcgcgtg
acgctggtgggcgtggtggcgcccgatgcatccttgttcagccacgacttccgtgccggc
gagcacctgttcgcctcgctgatgcaggtggccgggcgcgccggccgtgccgggctggcg
ggcgaagtgctgatccagacccgctatccggatgcccccgccctgctggcgctggtgcgg
cacgactacgccggcttcgcgcgccaactgctgcgcgagcgcaagcaggcctgcctgccg
ccgttcgcctaccaggcgctgctgaccgccgagcaccgcgagctggcgcgcgcgctggaa
tttctcggcgccgcgcgcgcggccgggcaggccgtggccgaggcccagggtttgccggtg
caactgcacgacccggtgcccatgaccatggtgcgcctggccaaccgcgaacgcgcccaa
ctgttgctcgagagcgcttcgcgcgccgccctgcaacggctgctggccgcctggaccgac
gggtttggcgagatcggccggacggtcaagggcgtgcgctggcagctcgagatcgacccg
ctgcggatctga
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