Ralstonia solanacearum CMR15: CMR15_10369
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Entry
CMR15_10369 CDS
T02725
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rsm
Ralstonia solanacearum CMR15
Pathway
rsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMR15_10369 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsm03019
]
CMR15_10369 (recQ)
03400 DNA repair and recombination proteins [BR:
rsm03400
]
CMR15_10369 (recQ)
Enzymes [BR:
rsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMR15_10369 (recQ)
Messenger RNA biogenesis [BR:
rsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CMR15_10369 (recQ)
DNA repair and recombination proteins [BR:
rsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMR15_10369 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
DUF5787
HHH
Motif
Other DBs
NCBI-ProteinID:
CBJ36578
LinkDB
All DBs
Position
408242..410155
Genome browser
AA seq
637 aa
AA seq
DB search
MFDSPAIDHALDALPEDTAAATRAVLHDVFGYSAFRGPQADIVAHVADGGDCLVLMPTGG
GKSLCYQIPALVRHRRGQGAGIVVSPLIALMQDQVAALEEAGVRAAYLNSALSGAEAAQV
ERDLAAGRLDLVYVAPERLMTPRFLELLERSRIGLFAIDEAHCVSQWGHDFRPEYIQLSV
LHERFPHVPRIALTATADAVTRDEIVERLALGGARVFLSSFDRPNIRYTIVEKDSARQQL
LRFIRAEHLGEDGCDAGIIYCLSRKKVEETAQWLAEQGLRALPYHAGMDVETRARHQAIF
RKEEGVVMVATIAFGMGIDKPDVRFVAHLDLPKSLEGYYQETGRAGRDGMPANAWMAYGL
ADVVQQRRMIDESDADDVHKRVSTAKLDALLGLCESAGCRRVALLAYFGESSEPCGNCDT
CLSPPQTWDATREAQMALSCVYRVQQASRVSFGAGQLIDILRGNATERIKQWHHETLSTF
GIGNALSEVAWRGVFRQLVAQGLLTVDHGGHGALVLTDAARPVLKGEQHVTLRRQAEKVR
AAPASGAKSERRADPAAELSAEAQVRWQALRVWRAQTAREHSVPAYVIFHDATLARIAES
DPASRDALAELPGIGVAKLDRYGQALLDVLAKCRGEA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattctcccgccattgaccacgcgctcgacgcgttgcccgaagatacggccgcc
gccacgcgcgccgtgctgcacgacgtgttcggctacagcgcgttccgcgggccgcaggcc
gacatcgttgcccacgtcgccgacggcggcgattgcctggtgctgatgcccaccggcggc
ggcaagtcgctctgctatcagattcccgccctggtgcggcaccggcgcggccagggtgcg
ggcatcgtggtctcgccgctgatcgccctgatgcaggaccaggtggccgcgctggaagaa
gccggcgtgcgcgccgcctacctcaattccgcgctcagcggcgccgaggccgcgcaggtc
gagcgcgatctggcggccggccggctcgatctcgtctacgtcgcgcccgaacggctgatg
acgccgcgcttcctcgaactgctggagcgctcgcgcatcggcctgttcgccatcgacgag
gcgcattgcgtgtcgcagtgggggcacgatttccggccggagtacatccagctctccgtg
ctgcacgagcgcttcccgcacgtgccgcgcatcgcgctgaccgccaccgccgacgccgtc
acgcgcgacgagatcgtcgagcggctggcgctgggcggcgcgcgcgtcttcctctccagc
ttcgaccgccccaacatccgctacaccatcgtcgagaaggacagcgcgcgccagcagctg
ctgcgcttcattcgcgccgagcatctcggcgaagacggctgcgacgccggcatcatctat
tgcctgtcgcgcaagaaggtggaagagaccgcgcagtggctggccgagcagggcctccgc
gcgctgccctaccacgccggtatggacgtcgagacgcgcgcccgccaccaggccatcttc
cgcaaggaggagggcgtggtgatggtggcgaccatcgccttcggcatgggcatcgacaag
ccggacgtgcgcttcgtcgcccatctggacttgcccaagagcctggagggctactaccag
gaaaccggccgcgccggccgcgacggcatgcccgccaacgcatggatggcctacggcctg
gccgacgtggtgcaacagcgccgcatgatcgacgagtccgacgccgacgacgtgcacaag
cgcgtctcgacggccaagctcgatgcgctgctggggctgtgcgagtcggcgggatgccgt
cgcgtggccctgctggcgtacttcggcgagtccagcgagccctgcggcaactgcgacacc
tgcctgagcccgccgcagacctgggacgcgacccgcgaggcgcagatggcgctgtcgtgc
gtgtaccgcgtgcagcaggccagccgcgtgagctttggcgccggccagctgatcgacatc
ctgcgcggcaacgctaccgagcgcatcaagcaatggcatcacgagacgctgtccactttc
ggtatcggcaatgccctgtcggaggtcgcgtggcgcggcgtgttccgccagctggtggcg
caggggctgctgacggtcgatcacggcggccatggcgccctggtgctgaccgacgccgcg
cgcccggtgctcaagggcgagcagcatgtgaccctgcggcgccaggcggagaaggtgcgc
gccgcgcccgcgtccggcgccaagtccgagcgccgcgcggatcccgccgccgagctatcg
gccgaggctcaggtgcgctggcaggcactgcgcgtctggcgggcccagaccgcgcgcgag
cacagcgtgcccgcctatgtgatcttccatgacgccacgctcgcccgcatcgccgaatcc
gatcccgcttcgcgcgacgcgctcgccgagttgcccggcatcggcgtcgccaagctggac
cgctacggccaggccttgctcgacgtgctggccaagtgccgcggcgaggcctag
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